RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ZC3H11AO75152 810 aaKnown RBP eCLIP20.02■□□□□ 0.79
SNX17-201ENST00000233575 CLSTN1O94985 981 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 ABL1P00519 1130 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 TNNC2P02585 160 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 CYLC1P35663 651 aaPredicted RBP20.02■□□□□ 0.79
SNX17-201ENST00000233575 MNX1P50219 401 aaPredicted RBP20.02■□□□□ 0.79
SNX17-201ENST00000233575 WDR44Q5JSH3 913 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 APBB1IPQ7Z5R6 666 aaPredicted RBP20.02■□□□□ 0.79
SNX17-201ENST00000233575 SNX27Q96L92 541 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 DEF6Q9H4E7 631 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 ERVK-5Q9HDB9 667 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 KLK14Q9P0G3 267 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 DAAM1Q9Y4D1 1078 aa20.02■□□□□ 0.79
SNX17-201ENST00000233575 SSU72P8A0A1W2PR75 194 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 EIF3CLB5ME19 914 aaKnown RBP20.01■□□□□ 0.79
SNX17-201ENST00000233575 AKR1B10O60218 316 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 ASS1P00966 412 aaKnown RBP20.01■□□□□ 0.79
SNX17-201ENST00000233575 PRKCIP41743 596 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 MFAP3P55082 362 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 TMEM132DQ14C87 1099 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 FAM26DQ5JW98 314 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 GLRA4Q5JXX5 417 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 FAM126BQ8IXS8 530 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 CXorf38Q8TB03 319 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 EIF3CQ99613 913 aaKnown RBP20.01■□□□□ 0.79
SNX17-201ENST00000233575 ACP6Q9NPH0 428 aa20.01■□□□□ 0.79
SNX17-201ENST00000233575 MEIS3P2A8K0S8 358 aa20■□□□□ 0.79
SNX17-201ENST00000233575 ZSCAN12O43309 604 aa20■□□□□ 0.79
SNX17-201ENST00000233575 MGEA5O60502 916 aa20■□□□□ 0.79
SNX17-201ENST00000233575 KRT19P08727 400 aa20■□□□□ 0.79
SNX17-201ENST00000233575 FERP16591 822 aa20■□□□□ 0.79
SNX17-201ENST00000233575 USP8P40818 1118 aa20■□□□□ 0.79
SNX17-201ENST00000233575 GCNT1Q02742 428 aa20■□□□□ 0.79
SNX17-201ENST00000233575 MBTPS1Q14703 1052 aa20■□□□□ 0.79
SNX17-201ENST00000233575 FBXO46Q6PJ61 603 aaPredicted RBP20■□□□□ 0.79
SNX17-201ENST00000233575 OLIG1Q8TAK6 271 aa20■□□□□ 0.79
SNX17-201ENST00000233575 U2AF1L4Q8WU68 220 aaKnown RBP20■□□□□ 0.79
SNX17-201ENST00000233575 SHC3Q92529 594 aa20■□□□□ 0.79
SNX17-201ENST00000233575 KIF12Q96FN5 646 aa20■□□□□ 0.79
SNX17-201ENST00000233575 GPR182O15218 404 aa20■□□□□ 0.79
SNX17-201ENST00000233575 ITGB3P05106 788 aa20■□□□□ 0.79
SNX17-201ENST00000233575 CLCN1P35523 988 aa20■□□□□ 0.79
SNX17-201ENST00000233575 ATN1P54259 1190 aaPredicted RBP20■□□□□ 0.79
SNX17-201ENST00000233575 PAK2Q13177 524 aa20■□□□□ 0.79
SNX17-201ENST00000233575 ALKAL1Q6UXT8 129 aa20■□□□□ 0.79
SNX17-201ENST00000233575 NYAP1Q6ZVC0 841 aa20■□□□□ 0.79
SNX17-201ENST00000233575 XYLT2Q9H1B5 865 aa20■□□□□ 0.79
SNX17-201ENST00000233575 LZTFL1Q9NQ48 299 aa20■□□□□ 0.79
SNX17-201ENST00000233575 PARP2Q9UGN5 583 aa20■□□□□ 0.79
SNX17-201ENST00000233575 ADAMTS1Q9UHI8 967 aa20■□□□□ 0.79
SNX17-201ENST00000233575 PCDHB2Q9Y5E7 798 aa20■□□□□ 0.79
SNX17-201ENST00000233575 A0A087X0T9 212 aa19.99■□□□□ 0.79
SNX17-201ENST00000233575 FAM228BP0C875 321 aa19.99■□□□□ 0.79
SNX17-201ENST00000233575 YARSP54577 528 aaKnown RBP19.99■□□□□ 0.79
SNX17-201ENST00000233575 TRPC3Q13507 836 aa19.99■□□□□ 0.79
SNX17-201ENST00000233575 FAM71AQ8IYT1 594 aa19.99■□□□□ 0.79
SNX17-201ENST00000233575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.99■□□□□ 0.79
SNX17-201ENST00000233575 CRISPLD2Q9H0B8 497 aa19.99■□□□□ 0.79
SNX17-201ENST00000233575 C2CD2Q9Y426 696 aa19.99■□□□□ 0.79
SNX17-201ENST00000233575 RCCD1A6NED2 376 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 CYP26A1O43174 497 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 CUL2Q13617 745 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 PLEKHA5Q9HAU0 1116 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 FAM105AQ9NUU6 356 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 TRIM10Q9UDY6 481 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 PDCD11Q14690 1871 aaKnown RBP19.98■□□□□ 0.79
SNX17-201ENST00000233575 LCA5LO95447 670 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 SGPL1O95470 568 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 CALCAP01258 141 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 HSPA1AP0DMV8 641 aaKnown RBP19.98■□□□□ 0.79
SNX17-201ENST00000233575 HSPA1BP0DMV9 641 aaKnown RBP19.98■□□□□ 0.79
SNX17-201ENST00000233575 DIS3LQ8TF46 1054 aaKnown RBP19.98■□□□□ 0.79
SNX17-201ENST00000233575 SLC20A1Q8WUM9 679 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 C18orf25Q96B23 403 aaPredicted RBP19.98■□□□□ 0.79
SNX17-201ENST00000233575 SYT11Q9BT88 431 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 IMPG2Q9BZV3 1241 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 CNTN3Q9P232 1028 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 TUBGCP4Q9UGJ1 667 aa19.98■□□□□ 0.79
SNX17-201ENST00000233575 BZW2Q9Y6E2 419 aaKnown RBP19.98■□□□□ 0.79
SNX17-201ENST00000233575 CCP110O43303 1012 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 PQBP1O60828 265 aaKnown RBP19.97■□□□□ 0.79
SNX17-201ENST00000233575 CAND2O75155 1236 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 CD4P01730 458 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 TFRCP02786 760 aaKnown RBP19.97■□□□□ 0.79
SNX17-201ENST00000233575 POLR2BP30876 1174 aaKnown RBP19.97■□□□□ 0.79
SNX17-201ENST00000233575 ARHGAP25P42331 645 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 SGSM1Q2NKQ1 1148 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 ZNF699Q32M78 642 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 SLC47A2Q86VL8 602 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 DNAAF5Q86Y56 855 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 CD302Q8IX05 232 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 LPPQ93052 612 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 IRX2Q9BZI1 471 aaPredicted RBP19.97■□□□□ 0.79
SNX17-201ENST00000233575 CHST12Q9NRB3 414 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 DPP3Q9NY33 737 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 FAM170AA1A519 330 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 ACO1P21399 889 aaKnown RBP19.97■□□□□ 0.79
SNX17-201ENST00000233575 ZBTB6Q15916 424 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 SLC18A3Q16572 532 aa19.97■□□□□ 0.79
SNX17-201ENST00000233575 ENOSF1Q7L5Y1 443 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms