RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ANKRD63C9JTQ0 380 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 NRP1O14786 923 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 KLRC4O43908 158 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 EXTL3O43909 919 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 TBX10O75333 385 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 TADA2AO75478 443 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 DDHD2O94830 711 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 IL18RAPO95256 599 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 RPL9P32969 192 aaKnown RBP12.26□□□□□ -0.45
SF3B6-201ENST00000233468 IRS1P35568 1242 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 SLC11A1P49279 550 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 ELAVL2Q12926 359 aaKnown RBP12.26□□□□□ -0.45
SF3B6-201ENST00000233468 KNOP1Q1ED39 458 aaKnown RBP12.26□□□□□ -0.45
SF3B6-201ENST00000233468 PUS10Q3MIT2 529 aaKnown RBP12.26□□□□□ -0.45
SF3B6-201ENST00000233468 ALKAL1Q6UXT8 129 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 ADGRD2Q7Z7M1 963 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 DDX53Q86TM3 631 aaKnown RBP12.26□□□□□ -0.45
SF3B6-201ENST00000233468 CEP120Q8N960 986 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 GSTCDQ8NEC7 633 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 SCFD1Q8WVM8 642 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 HPS3Q969F9 1004 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 ENTPD7Q9NQZ7 604 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 MIOSQ9NXC5 875 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 CPSF3Q9UKF6 684 aaKnown RBP12.26□□□□□ -0.45
SF3B6-201ENST00000233468 DERAQ9Y315 318 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 PCDHGC5Q9Y5F6 944 aa12.26□□□□□ -0.45
SF3B6-201ENST00000233468 MYH15Q9Y2K3 1946 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 PTGESO14684 152 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 MBTPS2O43462 519 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 DCXO43602 365 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 TRAPPC3O43617 180 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 GADD45BO75293 160 aaPredicted RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 CXCL8P10145 99 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 ALADP13716 330 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 CYP3A5P20815 502 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 PAX3P23760 479 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 ADSSP30520 456 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 PPP1R2P41236 205 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 AFF1P51825 1210 aaKnown RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 KCNA1Q09470 495 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 STK4Q13043 487 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 SMC1AQ14683 1233 aaKnown RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 SURF1Q15526 300 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 SLC10A6Q3KNW5 377 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 SLC39A4Q6P5W5 647 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 DCLRE1AQ6PJP8 1040 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 TMC7Q7Z402 723 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 ALYREFQ86V81 257 aaKnown RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 NT5DC4Q86YG4 428 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 ADHFE1Q8IWW8 467 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 GPD1LQ8N335 351 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 DNAJB4Q9UDY4 337 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 UBQLN1Q9UMX0 589 aaKnown RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 LHX6Q9UPM6 363 aa12.25□□□□□ -0.45
SF3B6-201ENST00000233468 PRG3Q9Y2Y8 225 aaPredicted RBP12.25□□□□□ -0.45
SF3B6-201ENST00000233468 TTC26A0AVF1 554 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 ZNF233A6NK53 670 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 NT5C1B-RDH14C9J2C7 533 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 PDXKO00764 312 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 SF3B1O75533 1304 aaKnown RBP eCLIP12.24□□□□□ -0.45
SF3B6-201ENST00000233468 ADRB2P07550 413 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 PBX3P40426 434 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 ACOT2P49753 483 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 ADAM15Q13444 863 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 PNOCQ13519 176 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 STIM1Q13586 685 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 MYBPC2Q14324 1141 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 SMAD2Q15796 467 aaKnown RBP12.24□□□□□ -0.45
SF3B6-201ENST00000233468 ENOX2Q16206 610 aaKnown RBP12.24□□□□□ -0.45
SF3B6-201ENST00000233468 SEZ6Q53EL9 994 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 GLRA4Q5JXX5 417 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 KIAA1841Q6NSI8 718 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 PDXDC1Q6P996 788 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 HFE2Q6ZVN8 426 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 NELFCDQ8IXH7 590 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 C12orf56Q8IXR9 622 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 VPS52Q8N1B4 723 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 BEST2Q8NFU1 509 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 CACTINQ8WUQ7 758 aaKnown RBP12.24□□□□□ -0.45
SF3B6-201ENST00000233468 CDCA3Q99618 268 aaPredicted RBP12.24□□□□□ -0.45
SF3B6-201ENST00000233468 TCF25Q9BQ70 676 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 FAM213AQ9BRX8 229 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 FGFBP2Q9BYJ0 223 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 HAPLN2Q9GZV7 340 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 AGPAT3Q9NRZ7 376 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 MUTYHQ9UIF7 546 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 ADAM28Q9UKQ2 775 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 R3HCC1Q9Y3T6 440 aaKnown RBP12.24□□□□□ -0.45
SF3B6-201ENST00000233468 C2CD2Q9Y426 696 aa12.24□□□□□ -0.45
SF3B6-201ENST00000233468 CASTOR2A6NHX0 329 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 LACTBL1A8MY62 500 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 TMEM189-UBE2V1I3L0A0 370 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 FAM189A1O60320 539 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 B3GAT3O94766 335 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 SOD2P04179 222 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 URODP06132 367 aa12.23□□□□□ -0.45
SF3B6-201ENST00000233468 SRGAP2BP0DMP2 458 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms