RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 EDEM3Q9BZQ6 932 aa10.56□□□□□ -0.72
TTC1-201ENST00000231238 FAM49AQ9H0Q0 323 aaPredicted RBP10.56□□□□□ -0.72
TTC1-201ENST00000231238 SETD4Q9NVD3 440 aa10.56□□□□□ -0.72
TTC1-201ENST00000231238 CEP72Q9P209 647 aa10.56□□□□□ -0.72
TTC1-201ENST00000231238 GINS2Q9Y248 185 aa10.56□□□□□ -0.72
TTC1-201ENST00000231238 WDR81Q562E7 1941 aa10.56□□□□□ -0.72
TTC1-201ENST00000231238 NRCAMQ92823 1304 aa10.56□□□□□ -0.72
TTC1-201ENST00000231238 EXTL3O43909 919 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 ERLIN2O94905 339 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 F2P00734 622 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 VTNP04004 478 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 SMIM10L2AP0DMW4 78 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 SMIM10L2BP0DMW5 78 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 DLATP10515 647 aaKnown RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 CYLC1P35663 651 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 KCNJ6P48051 423 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 MXI1P50539 228 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 SRSF11Q05519 484 aaKnown RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 RAPGEF1Q13905 1077 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 TDRD12Q587J7 1177 aaKnown RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 EFHC2Q5JST6 749 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 SFMBT2Q5VUG0 894 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 ZPBP2Q6X784 338 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 CBWD2Q8IUF1 395 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 AGPAT5Q9NUQ2 364 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 NDFIP2Q9NV92 336 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 PRMT7Q9NVM4 692 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 SRRDQ9UH36 339 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 A0A087WZ62 844 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 A0A1W2PNR3 127 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 C17orf102A2RUQ5 167 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 GTPBP10A4D1E9 387 aaKnown RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 GOLGA6L9A6NEM1 432 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 SOWAHDA6NJG2 315 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 SEPT4O43236 478 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 FKTNO75072 461 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 OFD1O75665 1012 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 PIGRP01833 764 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 GJB1P08034 283 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 CCDC175P0C221 793 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 CYP2C9P11712 490 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 CYBAP13498 195 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 ELNP15502 786 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 TNNI1P19237 187 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 ADSSP30520 456 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 GCLMP48507 274 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 CDC42EP1Q00587 391 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 PTPN14Q15678 1187 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 FAM47CQ5HY64 1035 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 ZNF385CQ66K41 422 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 CDCA2Q69YH5 1023 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 APBB1IPQ7Z5R6 666 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 CCAR2Q8N163 923 aaKnown RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 VTI1AQ96AJ9 217 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 BORCS6Q96GS4 357 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 CCDC42Q96M95 316 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 C16orf45Q96MC5 204 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 DNAJC7Q99615 494 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 FDXACB1Q9BRP7 624 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 MTG1Q9BT17 334 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 CFHR5Q9BXR6 569 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 TMX1Q9H3N1 280 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 XPNPEP3Q9NQH7 507 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 RBAKQ9NYW8 714 aaPredicted RBP10.55□□□□□ -0.72
TTC1-201ENST00000231238 HCN2Q9UL51 889 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 USP20Q9Y2K6 914 aa10.55□□□□□ -0.72
TTC1-201ENST00000231238 LRRC53A6NM62 1247 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ACKR2O00590 384 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 P4HA2O15460 535 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 BNIP3LO60238 219 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 PHACTR2O75167 634 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 TOM1L1O75674 476 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 PGK1P00558 417 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 HMGCRP04035 888 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ADRB2P07550 413 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ACTN1P12814 892 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 SLC9A1P19634 815 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 PON1P27169 355 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ACOT2P49753 483 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 NLRP11P59045 1033 aaKnown RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 PTENP60484 403 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 HTRA3P83110 453 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ARID5AQ03989 594 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 CYP24A1Q07973 514 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 CACNB2Q08289 660 aaPredicted RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 KCNMA1Q12791 1236 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 BIRC3Q13489 604 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 SPA17Q15506 151 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ENOX2Q16206 610 aaKnown RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 ASIC2Q16515 512 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 SLC9C1Q4G0N8 1177 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 ATF7IP2Q5U623 682 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 SLC39A4Q6P5W5 647 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 PDXDC1Q6P996 788 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 FMNL3Q8IVF7 1028 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 TMEM174Q8WUU8 243 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms