RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 CCDC77Q9BR77 488 aa16.45■□□□□ 0.22
VTN-201ENST00000226218 RGPD3A6NKT7 1758 aaPredicted RBP16.44■□□□□ 0.22
VTN-201ENST00000226218 RGPD4Q7Z3J3 1758 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 F5H6K3 240 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 K7ENM7 598 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 RAD21O60216 631 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 ECE2O60344 883 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 KLRC2P26717 231 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 SPARCL1Q14515 664 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 GMCL1P1Q8NEA9 526 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 SUPT20HQ8NEM7 779 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 TTC8Q8TAM2 541 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 HELQQ8TDG4 1101 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 SEMA4DQ92854 862 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 FAM136AQ96C01 138 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 GMCL1Q96IK5 515 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 FOXP3Q9BZS1 431 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 DENND2DQ9H6A0 471 aaPredicted RBP16.44■□□□□ 0.22
VTN-201ENST00000226218 TMEM206Q9H813 350 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 LNPEPQ9UIQ6 1025 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.44■□□□□ 0.22
VTN-201ENST00000226218 ASB3Q9Y575 518 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 LY75O60449 1722 aa16.44■□□□□ 0.22
VTN-201ENST00000226218 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 SPAG7O75391 227 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 PTDSS1P48651 473 aaKnown RBP16.43■□□□□ 0.22
VTN-201ENST00000226218 SARNPP82979 210 aaKnown RBP16.43■□□□□ 0.22
VTN-201ENST00000226218 PTP4A2Q12974 167 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 CCNG2Q16589 344 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
VTN-201ENST00000226218 IZUMO3Q5VZ72 239 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 TRIM68Q6AZZ1 485 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
VTN-201ENST00000226218 LMNTD2Q8IXW0 634 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 ZCCHC9Q8N567 271 aaKnown RBP16.43■□□□□ 0.22
VTN-201ENST00000226218 SYT15Q9BQS2 421 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 KIAA1586Q9HCI6 787 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 SPDYE5A6NIY4 337 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 SIGLEC16A6NMB1 481 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 MAP3K13O43283 966 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 TOM1O60784 492 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 ADRB2P07550 413 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 MAGEA4P43358 317 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 ALCAMQ13740 583 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 CLEC16AQ2KHT3 1053 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 CTC1Q2NKJ3 1217 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 THEMIS2Q5TEJ8 643 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 CCDC89Q8N998 374 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 XXYLT1Q8NBI6 393 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 ZBTB10Q96DT7 871 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 UNC45AQ9H3U1 944 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 AVENQ9NQS1 362 aaPredicted RBP16.43■□□□□ 0.22
VTN-201ENST00000226218 HSPBP1Q9NZL4 362 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 ANAPC7Q9UJX3 599 aa16.43■□□□□ 0.22
VTN-201ENST00000226218 EIF4E1BA6NMX2 242 aaKnown RBP16.42■□□□□ 0.22
VTN-201ENST00000226218 C2CD2LO14523 706 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 UPP2O95045 317 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 CBX6O95503 412 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 NDUFB10O96000 172 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 FGFR1P11362 822 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 PTPN4P29074 926 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 MAPK4P31152 587 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 SLC1A1P43005 524 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 VPS41P49754 854 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 MFAP3P55082 362 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 SLC45A4Q5BKX6 768 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 ANKS1BQ7Z6G8 1248 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 PPM1KQ8N3J5 372 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 TRABDQ9H4I3 376 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 SMG5Q9UPR3 1016 aaKnown RBP16.42■□□□□ 0.22
VTN-201ENST00000226218 COQ4Q9Y3A0 265 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 NUMBLQ9Y6R0 609 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 KLHL33A6NCF5 533 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 FAM196BA6NMK8 535 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 TYROBPO43914 113 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 FDX1P10109 184 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 UNGP13051 313 aaPredicted RBP16.42■□□□□ 0.22
VTN-201ENST00000226218 ALDH3A1P30838 453 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 ZNF333Q96JL9 665 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 ACCSQ96QU6 501 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 RBM15Q96T37 977 aaKnown RBP eCLIP16.42■□□□□ 0.22
VTN-201ENST00000226218 MIPEPQ99797 713 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 PAIP2Q9BPZ3 127 aaKnown RBP16.42■□□□□ 0.22
VTN-201ENST00000226218 LXNQ9BS40 222 aa16.42■□□□□ 0.22
VTN-201ENST00000226218 EXOC1LA0A1B0GW35 172 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 GAS7O60861 476 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 ENTPD5O75356 428 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 RALAP11233 206 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 NEFHP12036 1026 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 RASSF2P50749 326 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 GPC3P51654 580 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 SLC1A5Q15758 541 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 CERKLQ49MI3 558 aaPredicted RBP16.41■□□□□ 0.22
VTN-201ENST00000226218 ZNF449Q6P9G9 518 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 HHIPL2Q6UWX4 724 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 OTOAQ7RTW8 1153 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 CCDC125Q86Z20 511 aa16.41■□□□□ 0.22
VTN-201ENST00000226218 RBBP8NLQ8NC74 664 aaPredicted RBP16.41■□□□□ 0.22
VTN-201ENST00000226218 FBXO41Q8TF61 875 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms