RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CNOT10Q9H9A5 744 aaKnown RBP19.47■□□□□ 0.71
CLIP2-201ENST00000223398 INTUQ9ULD6 942 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 HPS5Q9UPZ3 1129 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 TNS2Q63HR2 1409 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 CCDC151A5D8V7 595 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 B3GAT3O94766 335 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 SYF2O95926 243 aaKnown RBP19.47■□□□□ 0.71
CLIP2-201ENST00000223398 NUMBP49757 651 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 MKRN4PQ13434 485 aaPredicted RBP19.47■□□□□ 0.71
CLIP2-201ENST00000223398 PCSK7Q16549 785 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 ATPAF2Q8N5M1 289 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 DCUN1D1Q96GG9 259 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 CPB2Q96IY4 423 aa19.47■□□□□ 0.71
CLIP2-201ENST00000223398 KDM4FA0A1W2PPD8 638 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ATMINO43313 823 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 NCLNQ969V3 563 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 MAP3K14Q99558 947 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ZC3H13Q5T200 1668 aaKnown RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 EEF2KO00418 725 aaKnown RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ZC3H11AO75152 810 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 BRD2P25440 801 aaKnown RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 GTF2H1P32780 548 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ANKMY2Q8IV38 441 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 TMX2Q9Y320 296 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 CSDE1O75534 798 aaKnown RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 TAF6P49848 677 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ALS2CLQ60I27 953 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 GPAT2Q6NUI2 795 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 SENP7Q9BQF6 1050 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 FHDC1Q9C0D6 1143 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 TBX20Q9UMR3 447 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ANP32DO95626 131 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ETFBP38117 255 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 KLHL38Q2WGJ6 581 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 SLC35G2Q8TBE7 412 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ADAM33Q9BZ11 813 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 WNT10BO00744 389 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 STAG3L1P0CL83 205 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 MX2P20592 715 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 CHRNA3P32297 505 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 FXR2P51116 673 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 ARRDC4Q8NCT1 418 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 CALR3Q96L12 384 aaKnown RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 DRC3Q9H069 523 aa19.46■□□□□ 0.71
CLIP2-201ENST00000223398 CHORDC1Q9UHD1 332 aaPredicted RBP19.46■□□□□ 0.71
CLIP2-201ENST00000223398 RSPH10B2B2RC85 870 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 RSPH10BP0C881 870 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 NCAM1P13591 858 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 PMS2P54278 862 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 HIPK4Q8NE63 616 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 FAM118BQ9BPY3 351 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 AGPAT5Q9NUQ2 364 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 DPP3Q9NY33 737 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 ORC6Q9Y5N6 252 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 GPR182O15218 404 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 CYP2C8P10632 490 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 FASTKD1Q53R41 847 aaKnown RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 CYP4A22Q5TCH4 519 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 DACT3Q96B18 629 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 RNPC3Q96LT9 517 aaKnown RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 YME1L1Q96TA2 773 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 CHP1Q99653 195 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 Q9H521 79 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 ENTPD7Q9NQZ7 604 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 RFC1P35251 1148 aaPredicted RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 GALCP54803 685 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 GJB7Q6PEY0 223 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 KIF2CQ99661 725 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 ANO9A1A5B4 782 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 KIF3CO14782 793 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 ATP1A1P05023 1023 aaKnown RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 KLRC1P26715 233 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 AKT1P31749 480 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 HERVK_113P62684 666 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 CAPRIN1Q14444 709 aaKnown RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 EMBQ6PCB8 327 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 TMEM8AQ9HCN3 771 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 AAASQ9NRG9 546 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 KRT82Q9NSB4 513 aa19.45■□□□□ 0.7
CLIP2-201ENST00000223398 PPARGC1AQ9UBK2 798 aaKnown RBP19.45■□□□□ 0.7
CLIP2-201ENST00000223398 TMEM247A6NEH6 219 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 USP27XA6NNY8 438 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 CYP11B2P19099 503 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 SPARCL1Q14515 664 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 EPM2AIP1Q7L775 607 aaPredicted RBP19.44■□□□□ 0.7
CLIP2-201ENST00000223398 SNF8Q96H20 258 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 SPATC1LQ9H0A9 340 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 KPNA7A9QM74 516 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 ESRRAP11474 423 aaPredicted RBP19.44■□□□□ 0.7
CLIP2-201ENST00000223398 TWF1Q12792 350 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 CHSY1Q86X52 802 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 AGR3Q8TD06 166 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 ASAP3Q8TDY4 903 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 NIF3L1Q9GZT8 377 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 KLK7P49862 253 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 RBBP7Q16576 425 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 LCA5Q86VQ0 697 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 SPATS2Q86XZ4 545 aaKnown RBP19.44■□□□□ 0.7
CLIP2-201ENST00000223398 KLHL29Q96CT2 875 aa19.44■□□□□ 0.7
CLIP2-201ENST00000223398 SLITRK1Q96PX8 696 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms