RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 ERFP50548 548 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 RBP5P82980 135 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 ZNF467Q7Z7K2 595 aaPredicted RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 TBC1D16Q8TBP0 767 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 RUBCNLQ9H714 662 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 KLK7P49862 253 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 KRT72Q14CN4 511 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 LONP2Q86WA8 852 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 RBBP8NLQ8NC74 664 aaPredicted RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 ZNF473Q8WTR7 871 aaKnown RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 ARHGEF26Q96DR7 871 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 TSSK1BQ9BXA7 367 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 UVRAGQ9P2Y5 699 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 C3orf70A6NLC5 250 aaPredicted RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 UCHL3P15374 230 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 PDGFRAP16234 1089 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 HMOX2P30519 316 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 CHRNA5P30532 468 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 CCZ1BP86790 482 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 CCZ1P86791 482 aaPredicted RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 LRIG3Q6UXM1 1119 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 DDX53Q86TM3 631 aaKnown RBP18.78■□□□□ 0.6
EXTL3-201ENST00000220562 ATPAF2Q8N5M1 289 aa18.78■□□□□ 0.6
EXTL3-201ENST00000220562 MYMKA6NI61 221 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 ARL2BPQ9Y2Y0 163 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
EXTL3-201ENST00000220562 EEF2KO00418 725 aaKnown RBP18.77■□□□□ 0.6
EXTL3-201ENST00000220562 RHOBTB3O94955 611 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 RASGRP2Q7LDG7 609 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 OTULINQ96BN8 352 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 SMARCAL1Q9NZC9 954 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 NEU2Q9Y3R4 380 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 STXBP3O00186 592 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 PJA2O43164 708 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 DGAT1O75907 488 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 CLEC10AQ8IUN9 316 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 SH2D3CQ8N5H7 860 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 RBM15Q96T37 977 aaKnown RBP eCLIP18.77■□□□□ 0.6
EXTL3-201ENST00000220562 FAM118BQ9BPY3 351 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 SLC24A3Q9HC58 644 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 SENP1Q9P0U3 644 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 PCDHGB4Q9UN71 923 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 FHOD1Q9Y613 1164 aa18.77■□□□□ 0.6
EXTL3-201ENST00000220562 PSMD3O43242 534 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 MAN1A2O60476 641 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 PDGFRBP09619 1106 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 BAATQ14032 418 aaPredicted RBP18.77■□□□□ 0.59
EXTL3-201ENST00000220562 NR1I3Q14994 352 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 SYTL3Q4VX76 610 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 XKR3Q5GH77 459 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 E2F8A0AVK6 867 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 MKRN4PQ13434 485 aaPredicted RBP18.77■□□□□ 0.59
EXTL3-201ENST00000220562 EMC2Q15006 297 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 ZC2HC1CQ53FD0 456 aaPredicted RBP18.77■□□□□ 0.59
EXTL3-201ENST00000220562 OLFM3Q96PB7 478 aa18.77■□□□□ 0.59
EXTL3-201ENST00000220562 ZC3H7BQ9UGR2 993 aaKnown RBP18.77■□□□□ 0.59
EXTL3-201ENST00000220562 SMG5Q9UPR3 1016 aaKnown RBP18.77■□□□□ 0.59
EXTL3-201ENST00000220562 SPHKAPQ2M3C7 1700 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 TMA16Q96EY4 203 aaKnown RBP18.76■□□□□ 0.59
EXTL3-201ENST00000220562 RAB6BQ9NRW1 208 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PCMTD2Q9NV79 361 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 ITIH2P19823 946 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 SGSM1Q2NKQ1 1148 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PLA2G4FQ68DD2 849 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 MFN1Q8IWA4 741 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PLA2G12BQ9BX93 195 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 CRB1P82279 1406 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 FOXP2O15409 715 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PIGHQ14442 188 aaPredicted RBP18.76■□□□□ 0.59
EXTL3-201ENST00000220562 ARHGEF38Q9NXL2 777 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PSMC3IPQ9P2W1 217 aaPredicted RBP18.76■□□□□ 0.59
EXTL3-201ENST00000220562 KCNA4P22459 653 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 KIZQ2M2Z5 673 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 SPDYAQ5MJ70 313 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 C4orf33Q8N1A6 199 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 NUP93Q8N1F7 819 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PDLIM2Q96JY6 352 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
EXTL3-201ENST00000220562 ICE2Q659A1 982 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 PATL1Q86TB9 770 aaKnown RBP18.76■□□□□ 0.59
EXTL3-201ENST00000220562 MED15Q96RN5 788 aa18.76■□□□□ 0.59
EXTL3-201ENST00000220562 ZNF197O14709 1029 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 TMEM62Q0P6H9 643 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 INPP5AQ14642 412 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 COG2Q14746 738 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 E4F1Q66K89 784 aaPredicted RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 RRM2BQ7LG56 351 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 AP3B1O00203 1094 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 BYSLQ13895 437 aaKnown RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 CYTH1Q15438 398 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 CCDC85BQ15834 202 aaPredicted RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 ATMINO43313 823 aaPredicted RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 GRAP2O75791 330 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 OCM2P0CE71 109 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 OCMP0CE72 109 aaPredicted RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 IRF1P10914 325 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 MAP4P27816 1152 aaKnown RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 TRADDQ15628 312 aa18.75■□□□□ 0.59
EXTL3-201ENST00000220562 ACBD5Q5T8D3 534 aaPredicted RBP18.75■□□□□ 0.59
EXTL3-201ENST00000220562 MICALL2Q8IY33 904 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms