RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 MIF4GDA9UHW6 222 aaKnown RBP15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 SRP72O76094 671 aaKnown RBP15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 GDF11O95390 407 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 PSMC3P17980 439 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 RRM2P31350 389 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 KCNQ4P56696 695 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 CDC16Q13042 620 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 ARMC6Q6NXE6 501 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 MUC3BQ9H195 1237 aa15.32■□□□□ 0.04
SPTLC2-201ENST00000216484 CENPXA8MT69 81 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 APBA3O96018 575 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 PHKA1P46020 1223 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 SLC44A2Q8IWA5 706 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 RNFT2Q96EX2 444 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 SNTNA6NMZ2 147 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ADORA2BP29275 332 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 KLHL12Q53G59 568 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 DGKKQ5KSL6 1271 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 USP17L2Q6R6M4 530 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 PID1Q7Z2X4 250 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 C1orf54Q8WWF1 131 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 NINQ8N4C6 2090 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 MAGI1Q96QZ7 1491 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 RALAP11233 206 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 TBXAS1P24557 533 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 CC2D1AQ6P1N0 951 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 VPS37AQ8NEZ2 397 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 LRRC39Q96DD0 335 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 FRMD6Q96NE9 622 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ZNF304Q9HCX3 659 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 BATF3Q9NR55 127 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 PARVAQ9NVD7 372 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ARHGEF38Q9NXL2 777 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 F8W810 466 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 MAP3K13O43283 966 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 SERPINH1P50454 418 aaKnown RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 SESN2P58004 480 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ERAP2Q6P179 960 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 RNF26Q9BY78 433 aaPredicted RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 BMP3P12645 472 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 TPI1P60174 286 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ARMC3Q5W041 872 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 LAYNQ6UX15 382 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 MACC1Q6ZN28 852 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ZNF614Q8N883 585 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 ADAM33Q9BZ11 813 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 CXorf56Q9H5V9 222 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 SLC52A2Q9HAB3 445 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 XPO7Q9UIA9 1087 aaKnown RBP15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 CCDC157Q569K6 752 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 IZUMO3Q5VZ72 239 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 KCNK16Q96T55 309 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 EYA1Q99502 592 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM213AQ9BRX8 229 aa15.31■□□□□ 0.04
SPTLC2-201ENST00000216484 TNFAIP2Q03169 654 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 APOL5Q9BWW9 433 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 PLEKHA5Q9HAU0 1116 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 TUFT1Q9NNX1 390 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 GCLMP48507 274 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 SUPT20HL1Q3ZLR7 823 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 BABAM1Q9NWV8 329 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 KLHL20Q9Y2M5 609 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 PRXQ9BXM0 1461 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 FTLP02792 175 aaPredicted RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 CCT3P49368 545 aaKnown RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 AP1S2P56377 157 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 ARHGEF7Q14155 803 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 TRABDQ9H4I3 376 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 GSTA3Q16772 222 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 HERC5Q9UII4 1024 aaKnown RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 ESYT3A0FGR9 886 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 SMAPO00193 183 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 HPGDP15428 266 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 ITGA3P26006 1051 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 ACTR2P61160 394 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 CDKL3Q8IVW4 592 aaPredicted RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 IPPQ9Y573 584 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 KCNK10P57789 538 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 VEPH1Q14D04 833 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 PTRHD1Q6GMV3 140 aaKnown RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 ZNF746Q6NUN9 644 aaPredicted RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM153AQ9UHL3 310 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 MMP1P03956 469 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 RBBP4Q09028 425 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 C1DQ13901 141 aaKnown RBP15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 C12orf60Q5U649 245 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 DNAJC9Q8WXX5 260 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 PAGE5Q96GU1 130 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 MAP10Q9P2G4 905 aa15.3■□□□□ 0.04
SPTLC2-201ENST00000216484 P4HA2O15460 535 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 ST8SIA6P61647 398 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 EPS8L2Q9H6S3 715 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 GCP02774 474 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 TRIM48Q8IWZ4 208 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 CEP72Q9P209 647 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms