RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 SNX12Q9UMY4 172 aa18.04■□□□□ 0.48
ITGB4-201ENST00000200181 SCP2P22307 547 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 PPP3CCP48454 512 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 XPO6Q96QU8 1125 aaKnown RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 XPO7Q9UIA9 1087 aaKnown RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 LAMC3Q9Y6N6 1575 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 FAM47DPA6NHR8 397 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 MLH1P40692 756 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 TRIP4Q15650 581 aaPredicted RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 UGP2Q16851 508 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 TRPM8Q7Z2W7 1104 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 CNPY4Q8N129 248 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 TNIP2Q8NFZ5 429 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 RBM15Q96T37 977 aaKnown RBP eCLIP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 FAM129AQ9BZQ8 928 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 ZCWPW1Q9H0M4 648 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 GABBR1Q9UBS5 961 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 FBXO40Q9UH90 709 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 TCOF1Q13428 1488 aaKnown RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 ZNF185O15231 689 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 CDH16O75309 829 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 FOPNLQ96NB1 174 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 STRBPQ96SI9 672 aaKnown RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 ITIH2P19823 946 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 ZNF200P98182 395 aaPredicted RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 SLC44A4Q53GD3 710 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 SWSAP1Q6NVH7 229 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 FRMD5Q7Z6J6 570 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 WDR48Q8TAF3 677 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 PTPRN2Q92932 1015 aa18.03■□□□□ 0.48
ITGB4-201ENST00000200181 NFKBIL1Q9UBC1 381 aaPredicted RBP18.03■□□□□ 0.48
ITGB4-201ENST00000200181 AGBL2Q5U5Z8 902 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 TBC1D10CQ8IV04 446 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 MS4A14Q96JA4 679 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 AGAP3Q96P47 875 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 DDX50Q9BQ39 737 aaKnown RBP18.02■□□□□ 0.48
ITGB4-201ENST00000200181 MRGBPQ9NV56 204 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 ASNSP08243 561 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 TRIM71Q2Q1W2 868 aaKnown RBP18.02■□□□□ 0.48
ITGB4-201ENST00000200181 CCDC81Q6ZN84 652 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 ADCK2Q7Z695 626 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 B2RBV5 119 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 SUPT3HB4E1H0 165 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 CYP26A1O43174 497 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 ASMTLO95671 621 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 MRPS35P82673 323 aaKnown RBP18.02■□□□□ 0.48
ITGB4-201ENST00000200181 TP53BP2Q13625 1128 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 MEI1Q5TIA1 1274 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.48
ITGB4-201ENST00000200181 PRG3Q9Y2Y8 225 aaPredicted RBP18.02■□□□□ 0.48
ITGB4-201ENST00000200181 GOLGA8TH3BQL2 631 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 BRD2P25440 801 aaKnown RBP18.02■□□□□ 0.47
ITGB4-201ENST00000200181 TRIM16LQ309B1 348 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 ARHGAP17Q68EM7 881 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 VPS50Q96JG6 964 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 APRTP07741 180 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 CPB1P15086 417 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 KIF2BQ8N4N8 673 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 SNX31Q8N9S9 440 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 NSUN6Q8TEA1 469 aaKnown RBP18.02■□□□□ 0.47
ITGB4-201ENST00000200181 SLC10A4Q96EP9 437 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 KIF12Q96FN5 646 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 ZNF560Q96MR9 790 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 WDR24Q96S15 920 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 PLEKHF1Q96S99 279 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 SRPK1Q96SB4 655 aaKnown RBP18.02■□□□□ 0.47
ITGB4-201ENST00000200181 SHANK2Q9UPX8 1470 aa18.02■□□□□ 0.47
ITGB4-201ENST00000200181 CACNB2Q08289 660 aaPredicted RBP18.01■□□□□ 0.47
ITGB4-201ENST00000200181 PTK7Q13308 1070 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 YIPF2Q9BWQ6 316 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 CD274Q9NZQ7 290 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 AGO2Q9UKV8 859 aaKnown RBP18.01■□□□□ 0.47
ITGB4-201ENST00000200181 PKP3Q9Y446 797 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 ABCC2Q92887 1545 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 NBPF26B4DH59 902 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 CYP2D6P10635 497 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 KCNK10P57789 538 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 CYB5R4Q7L1T6 521 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 PRPF39Q86UA1 669 aaKnown RBP18.01■□□□□ 0.47
ITGB4-201ENST00000200181 NBPF15Q8N660 670 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 BRD8Q9H0E9 1235 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 PPCSQ9HAB8 311 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 SLAIN2Q9P270 581 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 NEU2Q9Y3R4 380 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 RNF103O00237 685 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 LXNQ9BS40 222 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
ITGB4-201ENST00000200181 USP17L10C9JJH3 530 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 MTERF3Q96E29 417 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 PIDD1Q9HB75 910 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 DLGAP2Q9P1A6 1054 aa18.01■□□□□ 0.47
ITGB4-201ENST00000200181 NDUFS3O75489 264 aa18■□□□□ 0.47
ITGB4-201ENST00000200181 PSMA3P25788 255 aa18■□□□□ 0.47
ITGB4-201ENST00000200181 PSMC5P62195 406 aa18■□□□□ 0.47
ITGB4-201ENST00000200181 DUOXA2Q1HG44 320 aa18■□□□□ 0.47
ITGB4-201ENST00000200181 SNRNP48Q6IEG0 339 aaKnown RBP18■□□□□ 0.47
ITGB4-201ENST00000200181 CCDC60Q8IWA6 550 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms