RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 FAXDC2Q96IV6 333 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 TRAIPQ9BWF2 469 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
USH1C-201ENST00000005226 GAS8O95995 478 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 XKR9Q5GH70 373 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 ZNF365Q70YC5 407 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 BZW1Q7L1Q6 419 aaKnown RBP14.93□□□□□ -0.02
USH1C-201ENST00000005226 MAGEB18Q96M61 343 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 FHDC1Q9C0D6 1143 aaPredicted RBP14.93□□□□□ -0.02
USH1C-201ENST00000005226 HAO1Q9UJM8 370 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 GRID1Q9ULK0 1009 aa14.93□□□□□ -0.02
USH1C-201ENST00000005226 ATP9AO75110 1047 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 ATP5DP30049 168 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 QARSP47897 775 aaKnown RBP14.92□□□□□ -0.02
USH1C-201ENST00000005226 MTM1Q13496 603 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 MTFR1Q15390 333 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 P3H1Q32P28 736 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 FBXL13Q8NEE6 735 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 SLCO2A1Q92959 643 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 RBM15Q96T37 977 aaKnown RBP eCLIP14.92□□□□□ -0.02
USH1C-201ENST00000005226 C11orf70Q9BRQ4 267 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 RANBP17Q9H2T7 1088 aaKnown RBP14.92□□□□□ -0.02
USH1C-201ENST00000005226 SAYSD1Q9NPB0 183 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 KIF1CO43896 1103 aaKnown RBP14.92□□□□□ -0.02
USH1C-201ENST00000005226 SORBS3O60504 671 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 BANF1O75531 89 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 TCF4P15884 667 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 NPR1P16066 1061 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 CCND1P24385 295 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 DGKZQ13574 1117 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 FAM182AQ5T1J6 154 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 SLC39A4Q6P5W5 647 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 ARHGEF18Q6ZSZ5 1173 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 BSNDQ8WZ55 320 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 ACSF2Q96CM8 615 aaPredicted RBP14.92□□□□□ -0.02
USH1C-201ENST00000005226 ERP27Q96DN0 273 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 RIT2Q99578 217 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 TMX4Q9H1E5 349 aaPredicted RBP14.92□□□□□ -0.02
USH1C-201ENST00000005226 TBX20Q9UMR3 447 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 TMX2Q9Y320 296 aa14.92□□□□□ -0.02
USH1C-201ENST00000005226 DENND3A2RUS2 1198 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 FDX1P10109 184 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 EIF2AK2P19525 551 aaKnown RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 MAGEA4P43358 317 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 PKN2Q16513 984 aaKnown RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 ZFYVE27Q5T4F4 411 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 STRIP1Q5VSL9 837 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 ZNF449Q6P9G9 518 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 VSIG1Q86XK7 387 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 C12orf56Q8IXR9 622 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 TAB3Q8N5C8 712 aaPredicted RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 KIFAP3Q92845 792 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 HAUS1Q96CS2 278 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 IFT74Q96LB3 600 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 LBHD1Q9BQE6 289 aaPredicted RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 PLVAPQ9BX97 442 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 TMEM8AQ9HCN3 771 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 NEU2Q9Y3R4 380 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 ZNFX1Q9P2E3 1918 aaKnown RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 RBBP6Q7Z6E9 1792 aaKnown RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 CDH16O75309 829 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 MYCLP12524 364 aaPredicted RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 UNGP13051 313 aaPredicted RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 GCAP28676 217 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 PSMC4P43686 418 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 NPTX2P47972 431 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 MRPS9P82933 396 aaKnown RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 AOC3Q16853 763 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 TKFCQ3LXA3 575 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 SCARA3Q6AZY7 606 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 MIS18BP1Q6P0N0 1132 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 MAML1Q92585 1016 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 VTI1AQ96AJ9 217 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 FAM213AQ9BRX8 229 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 C12orf65Q9H3J6 166 aaKnown RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 ZMYND8Q9ULU4 1186 aaPredicted RBP14.91□□□□□ -0.02
USH1C-201ENST00000005226 TELO2Q9Y4R8 837 aa14.91□□□□□ -0.02
USH1C-201ENST00000005226 ASTN2O75129 1339 aaPredicted RBP14.9□□□□□ -0.02
USH1C-201ENST00000005226 MYPNQ86TC9 1320 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 MUTP22033 750 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 GPC3P51654 580 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 WNT7BP56706 349 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 STRN3Q13033 797 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 GBP7Q8N8V2 638 aaPredicted RBP14.9□□□□□ -0.02
USH1C-201ENST00000005226 TMEM161BQ8NDZ6 487 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 CCHCR1Q8TD31 782 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 ZNF516Q92618 1163 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 EHMT1Q9H9B1 1298 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 AGO4Q9HCK5 861 aaKnown RBP14.9□□□□□ -0.02
USH1C-201ENST00000005226 SLC5A4Q9NY91 659 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 CHKBQ9Y259 395 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 QSER1Q2KHR3 1735 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 EXOC1LA0A1B0GW35 172 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 A0A1W2PPM1 405 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 UNC5CO95185 931 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 DSG3P32926 999 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 LACTBP83111 547 aaPredicted RBP14.9□□□□□ -0.02
USH1C-201ENST00000005226 ANKRD20A2Q5SQ80 823 aa14.9□□□□□ -0.02
USH1C-201ENST00000005226 ANKRD20A1Q5TYW2 823 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms