RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 MmeQ61391 750 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Sin3bQ62141 1098 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tlr11Q6R5P0 926 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Krit1Q6S5J6 736 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gucy2gQ6TL19 1100 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Arhgap10Q6Y5D8 786 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Spag5Q7TME2 1165 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tdrd7Q8K1H1 1086 aaKnown RBP8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Smc1bQ920F6 1248 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Xrn2Q9DBR1 951 aaKnown RBP8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tcirg1Q9JHF5 834 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ripk3Q9QZL0 486 aa8.02□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gon4lQ9DB00 2260 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ralgapa2A3KGS3 1872 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Zfp597E9Q6S0 419 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cpsf2O35218 782 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tagap1P0CAX8 505 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Pcsk1P63239 753 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tatdn3Q3U1C6 294 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fgfr1opQ66JX5 399 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Serpina3bQ8BYY9 420 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 ClasrpQ8CFC7 668 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Vopp1Q8R1C3 172 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ube2sQ921J4 223 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 EpgnQ924X1 152 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Lrrc57Q9D1G5 239 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Mageb3Q9D2H4 330 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Trim54Q9ERP3 366 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 PigoQ9JJI6 1093 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm2030D3Z7C4 212 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm1758F6VZZ1 202 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cdk14O35495 469 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ptpn11P35235 597 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ppm1aP49443 382 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 HmgcrQ01237 887 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tubb2aQ7TMM9 445 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Vat1lQ80TB8 417 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Wdr3Q8BHB4 942 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ppfibp1Q8C8U0 969 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 CarfQ8VHI4 689 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tubb2bQ9CWF2 445 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Wnt8bQ9WUD6 350 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm4846B2RWH8 538 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ttc17E9PVB5 1198 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 PtgisO35074 501 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 JchainP01592 159 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Paxbp1P58501 919 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rad54lP70270 747 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tcp11Q01755 566 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ppp1r1bQ60829 194 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Jade1Q6ZPI0 834 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cdc23Q8BGZ4 597 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Adgrg3Q8R0T6 542 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Plekha4Q8VC98 588 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Unc93b1Q8VCW4 598 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Sar1bQ9CQC9 198 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Micu3Q9CTY5 523 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fam133bQ9CVI2 245 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Atp6ap2Q9CYN9 350 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Acsl3Q9CZW4 720 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Spata17Q9D552 379 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Mrpl2Q9D773 306 aaKnown RBP8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Trpm5Q9JJH7 1158 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Pdzd4Q9QY39 772 aa8.01□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gnl1P36916 607 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Lrch2Q3UMG5 773 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Mysm1Q69Z66 819 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 KaznQ69ZS8 779 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Q6GQV0 436 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Wscd1Q80XH4 572 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Nop53Q8BK35 484 aaKnown RBP8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tom1l1Q923U0 474 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Map4k3Q99JP0 894 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Slc26a3Q9WVC8 757 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Kcnd2Q9Z0V2 630 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Plxnb3Q9QY40 1902 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Spata31d1aE9QA35 1336 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Syngap1F6SEU4 1340 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rnf19bA2A7Q9 732 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tbkbp1A2A9T0 611 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Dpy19l4A2AJQ3 722 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rap1gapA2ALS5 663 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm12800B1AUV4 484 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm6133B2RY53 190 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Mroh9G5E8L9 891 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm12794L7MTS5 483 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Pitpnm1O35954 1243 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 MycP01108 439 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Lrrc4bP0C192 709 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 NsfP46460 744 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rmdn3Q3UJU9 470 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 HarsQ61035 509 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ints2Q80UK8 1198 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fam205cQ80YD3 371 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Spata20Q80YT5 790 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Znf830Q8R1N0 363 aaKnown RBP8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Nup58Q8R332 587 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Lrrc71Q9D3W5 558 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tmem86aQ9D8N3 241 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 B4galt4Q9JJ04 344 aa8□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 41.9 ms