RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 YarsQ91WQ3 528 aaKnown RBP13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gnl2Q99LH1 728 aaKnown RBP13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Zfyve19Q9DAZ9 389 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tlr6Q9EPW9 795 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rnf103Q9R1W3 683 aa13.14□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Otud7bB2RUR8 840 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lamp2P17047 415 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Parp3Q3ULW8 533 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Znf235Q61116 645 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Zcchc2Q69ZB8 1166 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Jade1Q6ZPI0 834 aaKnown RBP13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 MiosQ8VE19 875 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Mageb16Q9CWV4 363 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rfx5Q9JL61 658 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dnajc12Q9R022 198 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tle2Q9WVB2 767 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Atp6v0a1Q9Z1G4 839 aaKnown RBP13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cyp4a29A0A087WPC3 509 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Casp14O89094 257 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Smpd1Q04519 627 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Plk1Q07832 603 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Col19a1Q0VF58 1136 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Bpifa6Q0VGU8 367 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cd163Q2VLH6 1121 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rhox12Q4TU81 186 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Ccpg1Q640L3 753 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 CyldQ80TQ2 952 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rint1Q8BZ36 792 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fam78aQ8C552 283 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 PdxkQ8K183 312 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tcp11l2Q8K1H7 517 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Plagl2Q925T4 496 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Prc1Q99K43 603 aaKnown RBP13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lrrc71Q9D3W5 558 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cd97Q9Z0M6 818 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 1110002E22RikE0CYV9 1786 aa13.13□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Plekhg4A0A1L1SU27 1217 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Calcoco2A2A6M5 331 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tnnc2P20801 160 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Aldh1a1P24549 501 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cyth4Q80YW0 393 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tmem220Q8BP07 167 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dclk3Q8BWQ5 790 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Q8CCC3 530 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cog3Q8CI04 820 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Olfr1499Q8VG65 314 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Ces1fQ91WU0 561 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Fam76aQ922G2 307 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Krt17Q9QWL7 433 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 PtgisO35074 501 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Abcd1P48410 736 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Inpp5jP59644 1003 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vps72Q62481 368 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 RragaQ80X95 313 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Acad11Q80XL6 779 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lin9Q8C735 542 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Bicdl2Q8CHW5 507 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tada3Q8R0L9 432 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 DarsQ922B2 501 aaKnown RBP13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 1700020D05RikQ99PB1 294 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lman1Q9D0F3 517 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Tmem86aQ9D8N3 241 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Mkrn2Q9ERV1 416 aaKnown RBP13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm4756A0A140LIS8 335 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Gm45261A0A1B0GSP6 197 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Xpnpep3B7ZMP1 506 aaKnown RBP13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Ccl26F8VQM2 93 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vmn2r1O70410 912 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 JchainP01592 159 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 AcrP23578 436 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Dpep1P31428 410 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Pcsk1P63239 753 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Sparcl1P70663 650 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 EnahQ03173 802 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Kcnd1Q03719 651 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Klra9Q2TJJ8 266 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Nek10Q3UGM2 1111 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Xkr5Q5GH66 676 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cyp3a16Q64481 504 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Kctd6Q8BNL5 237 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Pwp2Q8BU03 919 aaKnown RBP13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Serpina3bQ8BYY9 420 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Kat5Q8CHK4 513 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Arl8aQ8VEH3 186 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 CarfQ8VHI4 689 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Nmrk1Q91W63 195 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Vmn1r65Q9EPS7 332 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Egfl6Q9JJZ5 550 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Ppp2r3dQ9Z176 491 aa13.12□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Plxna1P70206 1894 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cntnap4Q99P47 1310 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 2010300C02RikE9Q3M9 1175 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Cdc6O89033 562 aaKnown RBP13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Serpinc1P32261 465 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Rnf19aP50636 840 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Lman2lP59481 347 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 DsppP97399 934 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Myl6Q60605 151 aaKnown RBP13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 RetsatQ64FW2 609 aa13.11□□□□□ -0.31
Ddx55-202ENSMUST00000111438 Adcy2Q80TL1 1090 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms