RNA–Protein interactions for RNA: ENSMUST00000080461.11

Lig3-202, Transcript of DNA ligase 3, mousemouse

TSL 5 BASIC

Gene Lig3, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-202ENSMUST00000080461 Plxnb3Q9QY40 1902 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Zscan4-ps3A0A1B0GRH6 506 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Zscan4-ps2A0A1C7CYU6 506 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Akr1b10G5E895 316 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 IapP03975 557 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Nub1P54729 614 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Cyp4f37Q3V1F1 546 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 SpdyaQ5IBH7 310 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Ccdc157Q5SPX1 718 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Sema5aQ62217 1077 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Git1Q68FF6 770 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Hook3Q8BUK6 718 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Lamtor4Q8CF66 99 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 H6pdQ8CFX1 789 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gdap1l1Q8VE33 370 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Cfap57Q9D180 1249 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tmod3Q9JHJ0 352 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gm3138K7N754 218 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Slc12a2P55012 1205 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Anp32eP97822 260 aaKnown RBP13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Vps72Q62481 368 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gja6Q6S5G4 283 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gigyf2Q6Y7W8 1291 aaKnown RBP13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Neto2Q8BNJ6 525 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Scgb2b12S4R2L0 112 aa13.25□□□□□ -0.29
Lig3-202ENSMUST00000080461 Vmn2r87E9PZX4 848 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Ndufs6P52503 116 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Psmc4P54775 418 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Asprv1Q09PK2 339 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rmdn3Q3UJU9 470 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Cyfip2Q5SQX6 1253 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Anks6Q6GQX6 883 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Krt42Q6IFX2 452 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rpf1Q7TND5 349 aaKnown RBP13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Iqsec1Q8R0S2 961 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Nup58Q8R332 587 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Drc3Q9D5E4 523 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Znf804aA2AKY4 1200 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Ttc17E9PVB5 1198 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 SprtnG3X912 497 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 TyrobpO54885 114 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 ZfxP17012 799 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tap2P36371 702 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tspyl5Q69ZB3 406 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Pi4kbQ8BKC8 816 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Lrrc45Q8CIM1 670 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Vmn1r191Q8K4D0 298 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Csde1Q91W50 798 aaKnown RBP13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tsnaxip1Q99P25 704 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Nxnl2Q9D531 156 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rfx5Q9JL61 658 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Slc26a3Q9WVC8 757 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gm11985A0A1B0GS61 206 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Fbf1A2A870 1173 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Ptpn3A2ALK8 913 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Prpmp5E9PXN1 296 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Epha3P29319 983 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 ProcP33587 460 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tulp2P46686 562 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Srrm1Q52KI8 946 aaKnown RBP13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Fscn1Q61553 493 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Foxn1Q61575 648 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Pknox2Q8BG99 474 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Taf2Q8C176 1104 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Stxbp5Q8K400 1152 aaKnown RBP13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Arl2bpQ9D385 163 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rnf14Q9JI90 485 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rasgrp1Q9Z1S3 795 aa13.24□□□□□ -0.29
Lig3-202ENSMUST00000080461 Myh10Q61879 1976 aaKnown RBP13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gm42688A0A0R3P9D1 673 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Hoxc8P09025 242 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 PuraP42669 321 aaKnown RBP13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Vamp7P70280 220 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Atp9bP98195 1146 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Mief2Q5NCS9 454 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 C6.1alQ7M757 291 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 VcpkmtQ8C436 228 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Ccdc142Q8CAI1 738 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Btbd6Q8K2J9 488 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Trib2Q8K4K3 343 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Znf830Q8R1N0 363 aaKnown RBP13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Fbxo16Q9QZM9 334 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Spata31d1aE9QA35 1336 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Spata31d1dE9Q5W2 1247 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gm1661E9Q963 441 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tagap1P0CAX8 505 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Grm2Q14BI2 872 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Myl6Q60605 151 aaKnown RBP13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Fgfr1opQ66JX5 399 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Fam49aQ8BHZ0 323 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Nop53Q8BK35 484 aaKnown RBP13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rassf4Q8CB96 322 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 PhykplQ8R1K4 467 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 PawrQ925B0 333 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Fam173bQ9D1Z3 247 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Rsph3bQ9DA80 389 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 IdeQ9JHR7 1019 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Kank3Q9Z1P7 791 aa13.23□□□□□ -0.29
Lig3-202ENSMUST00000080461 Gm20503G3UZK1 150 aa13.22□□□□□ -0.29
Lig3-202ENSMUST00000080461 Tnnc2P20801 160 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms