RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fgfr1P16092 822 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Mybl1P51960 751 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nrp1P97333 923 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Klrb1Q0ZUP1 214 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Oog4Q4G0C7 502 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nyap1Q6PFX7 833 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Creb3l2Q8BH52 521 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Ugt3a2Q8JZZ0 523 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Nr3c2Q8VII8 978 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Lrrc34Q9DAM1 415 aa10.4□□□□□ -0.74
Ccdc40-202ENSMUST00000053440 Cyp4f40G3UW81 524 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Akr1b7P21300 316 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tulp2P46686 562 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 CtshP49935 333 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 ZufspQ3T9Z9 577 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Hook3Q8BUK6 718 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ldlrap1Q8C142 308 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Scrn2Q8VCA8 425 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Chchd3Q9CRB9 227 aaKnown RBP10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fundc1Q9DB70 155 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 JmyQ9QXM1 983 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mettl1Q9Z120 268 aa10.4□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Myh9Q8VDD5 1960 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 AfmO89020 608 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 TxkP42682 527 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Psmc5P62196 406 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Erbb2P70424 1256 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 GclcP97494 637 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 VegfaQ00731 214 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ttc39dQ0VF76 604 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Cdca2Q14B71 982 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Upf3bQ3ULL6 472 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 4933427I04RikQ3V053 235 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tom1l2Q5SRX1 507 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tdpoz4Q6YCH2 370 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 B4galnt4Q766D5 1034 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Vmn1r64Q8R2B8 320 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Znf445Q8R2V3 986 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tlr3Q99MB1 905 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Setd6Q9CWY3 473 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 DmgdhQ9DBT9 869 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gucy1a3Q9ERL9 691 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mzf1S4R1L6 814 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fam205a1D3YZF6 1314 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Prss51A0A286YDY8 319 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pagr1bF6V0H0 108 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Zfp212G3X8R7 492 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 TazI7HJS2 263 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Atp2a2O55143 1044 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rpl7aP12970 266 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 NppbP40753 121 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PtpreP49446 699 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ripk2P58801 539 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dnajc5P60904 198 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Frg1P97376 258 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ect2Q07139 913 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Grm2Q14BI2 872 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gxylt1Q3UHH8 404 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ddhd1Q80YA3 547 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ptrh1Q8BW00 204 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Q9D2Q3 444 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Riok3Q9DBU3 519 aaKnown RBP10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pds5aQ6A026 1332 aa10.39□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Akr1b8P45377 316 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Kcnn2P58390 839 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 SkiQ60698 725 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 WlsQ6DID7 541 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Heatr3Q8BQM4 679 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 NptxrQ99J85 493 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Hao1Q9WU19 370 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nrxn2E9Q7X7 1710 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 EloblA6PWE0 161 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm6588E9Q3K0 461 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ccdc138Q0VF22 680 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Dsg1aQ61495 1057 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gpd2Q64521 727 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 LnpkQ7TQ95 425 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ankfy1Q810B6 1169 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Ipo5Q8BKC5 1097 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Tph2Q8CGV2 488 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Hars2Q99KK9 505 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 AuhQ9JLZ3 314 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 PygmQ9WUB3 842 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Fem1bQ9Z2G0 627 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Srsf11E9Q6E5 511 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Scp2P32020 547 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Mnat1P51949 309 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Npr3P70180 536 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nat8lQ3UGX3 299 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Nt5c2Q3V1L4 560 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Vmn2r26Q6TAC4 855 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rnf139Q7TMV1 668 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 MogsQ80UM7 834 aaKnown RBP10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rhot1Q8BG51 631 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 GrapQ9CX99 217 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Rab11fip1Q9D620 645 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Pdzd4Q9QY39 772 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Clec4aQ9QZ15 238 aa10.38□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm4846B2RWH8 538 aa10.37□□□□□ -0.75
Ccdc40-202ENSMUST00000053440 Gm10436L7N1Y3 520 aa10.37□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms