RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Odr4Q4PJX1 447 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Zdhhc24Q6IR37 284 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Ttyh3Q6P5F7 524 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 SpopQ6ZWS8 374 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Rpf1Q7TND5 349 aaKnown RBP24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Zc3h6Q8BYK8 1177 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Stxbp5Q8K400 1152 aaKnown RBP24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Dr1Q91WV0 176 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Znf394Q9Z1D9 521 aa24.54■■□□□ 1.52
Cln6-201ENSMUST00000034776 Prdm15E9Q8T2 1174 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Gjb1P28230 283 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Tmod1P49813 359 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Mark2Q05512 776 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Sh3bp2Q06649 559 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Kdm7aQ3UWM4 940 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Ppp2r5eQ61151 467 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Tfap2bQ61313 459 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Tspyl5Q69ZB3 406 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Olfr392Q7TRX6 312 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Taf2Q8C176 1104 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 ClasrpQ8CFC7 668 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Trpc3Q9QZC1 836 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 TroapB7ZNG4 668 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Sptlc1O35704 473 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Birc5O70201 140 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Ptp4a2O70274 167 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Rnaseh1O70338 285 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Pnpla5Q32LZ8 432 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Fam193bQ3U2K0 892 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Wdr41Q3UDP0 460 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Celf4Q7TSY6 486 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Snx14Q8BHY8 964 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Cog3Q8CI04 820 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Cyp2d26Q8CIM7 500 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Ppp1r16bQ8VHQ3 568 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Pdzd4Q9QY39 772 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Hs6st3Q9QYK4 470 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Cul1Q9WTX6 776 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Rasgrp1Q9Z1S3 795 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 SrcapA0A087WQ44 3271 aa24.53■■□□□ 1.52
Cln6-201ENSMUST00000034776 Lrrc6O88978 473 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Serpinh1P19324 417 aaKnown RBP24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Tnnc2P20801 160 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Erich4Q3UNU4 136 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Znf12Q7TSI0 686 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Efl1Q8C0D5 1127 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Apol9bQ8C7I4 310 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Fam193aQ8CGI1 1231 aaKnown RBP24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Apol9aQ8VDU3 310 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Map4k3Q99JP0 894 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Rabl3Q9D4V7 236 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Rtn3Q9ES97 964 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Znhit2Q9QY66 399 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Kcnd2Q9Z0V2 630 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Prr14lE9Q7C4 1971 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Gm27029A2A4P4 543 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 DgkiD3YWQ0 1071 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Svs3aF2Z472 265 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Spink5Q148R4 1017 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Ppp4r3cQ3V0Y1 813 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Tdpoz2Q717B2 364 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Arrdc3Q7TPQ9 414 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Grik4Q8BMF5 956 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Lgi2Q8K4Z0 550 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Gadd45gQ9Z111 159 aa24.52■■□□□ 1.52
Cln6-201ENSMUST00000034776 Arhgef10Q8C033 1345 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Cfap221A9Q751 836 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Ass1P16460 412 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Arf4P61750 180 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Zmym1Q3TJB1 983 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 GmipQ6PGG2 971 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Slc7a14Q8BXR1 771 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Slc15a5Q8CBB2 566 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Slc5a4aQ9ET37 656 aa24.51■■□□□ 1.51
Cln6-201ENSMUST00000034776 Cyp2b10P12791 500 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 PrphP15331 475 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Suz12Q80U70 741 aaKnown RBP24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Slc20a2Q80UP8 656 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Folh1O35409 752 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 NfkbieO54910 364 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Eef1dP57776 281 aaKnown RBP24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Ndufaf2Q59J78 168 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Klhl17Q6TDP3 640 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Eif4bQ8BGD9 611 aaKnown RBP24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Micall1Q8BGT6 870 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Fam133bQ9CVI2 245 aaKnown RBP24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Mis12Q9CY25 206 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Capn9Q9D805 690 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Adgra2Q91ZV8 1336 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Ralgapa2A3KGS3 1872 aa24.5■■□□□ 1.51
Cln6-201ENSMUST00000034776 Irx2P81066 474 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Cdca2Q14B71 982 aaKnown RBP24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Kansl1lQ5DTI6 991 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 FntaQ61239 377 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Cwf19l2Q8BG79 887 aaKnown RBP24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Arhgap8Q9CXP4 425 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Nfe2Q07279 373 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Pou6f1Q07916 301 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Rnf40Q3U319 1001 aa24.49■■□□□ 1.51
Cln6-201ENSMUST00000034776 Skap2Q3UND0 358 aa24.49■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms