RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Serpina3iD3Z450 408 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cops5O35864 334 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Akr1b8P45377 316 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 YwhaeP62259 255 aaKnown RBP11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Abhd15Q5F2F2 459 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Spdye4aQ5IBH6 268 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 SrlQ7TQ48 910 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ints2Q80UK8 1198 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ppm1kQ8BXN7 372 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Prpf31Q8CCF0 499 aaKnown RBP11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Kat5Q8CHK4 513 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Znf445Q8R2V3 986 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fgfr1op2Q9CRA9 253 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Mrpl2Q9D773 306 aaKnown RBP11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cse1lQ9ERK4 971 aaKnown RBP11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fam129cD3YZB0 591 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gnl1P36916 607 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Oog4Q4G0C7 502 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Q6GQV0 436 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 OcrlQ6NVF0 900 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Abhd8Q8R0P8 439 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ero1bQ8R2E9 467 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Setd3Q91WC0 594 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 IscuQ9D7P6 168 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Kcnq4Q9JK97 696 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rasgrp1Q9Z1S3 795 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pitpnm2Q6ZPQ6 1335 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lonrf2B2RT44 518 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cyp4f40G3UW81 524 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Itgb5O70309 798 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Akr1b7P21300 316 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ppp2r5eQ61151 467 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tdpoz4Q6YCH2 370 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Man2a2Q8BRK9 1152 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lrrc57Q9D1G5 239 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Krt7Q9DCV7 457 aa11.5□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zfp142G5E869 1843 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Scgb2b7D3YYY1 112 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Oog1E9Q5G7 496 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Atf2P16951 487 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Caprin2Q05A80 1031 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fam81aQ3UXZ6 364 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Prm3Q62100 101 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zcchc2Q69ZB8 1166 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 PoliQ6R3M4 717 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Dzip3Q7TPV2 1204 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nop9Q8BMC4 636 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rabep2Q91WG2 554 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Slc12a6Q924N4 1150 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rrp15Q9CYX7 281 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Erbb2P70424 1256 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmem120bQ3TA38 339 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zfp90Q61967 636 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Klhdc10Q6PAR0 439 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Angel2Q8K1C0 544 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fkbp6Q91XW8 327 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fgd4Q91ZT5 766 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Senp2Q91ZX6 588 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rpap3Q9D706 660 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tex9Q9D845 387 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tlr2Q9QUN7 784 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Slc26a4Q9R155 780 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Znfx1Q8R151 1909 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Itga9B8JK39 1036 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 R3hdm1E9Q9Q2 1135 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 CfhP06909 1234 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 RalgdsQ03385 852 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Kndc1Q0KK55 1742 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Sec23ipQ6NZC7 998 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Agap1Q8BXK8 857 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Bri3bpQ8BXV2 253 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Sapcd2Q9D818 391 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rmdn1Q9DCV4 305 aa11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 PlekQ9JHK5 350 aaKnown RBP11.49□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lrrc63A6H694 637 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Prom1O54990 867 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ifnb1P01575 182 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 PtpraP18052 829 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 S100bP50114 92 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmed1Q3V009 227 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Odr4Q4PJX1 447 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 R3hdm4Q4VBF2 262 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Dlg4Q62108 724 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fbxo41Q6NS60 873 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Mrps5Q99N87 432 aaKnown RBP11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tlr5Q9JLF7 859 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Kcnq2Q9Z351 759 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Thsd7aQ69ZU6 1645 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tet3Q8BG87 1668 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Znf609Q8BZ47 1413 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gm5737A0A140LI11 423 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ttll6A4Q9E8 822 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 BhmtO35490 407 aaKnown RBP11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Magea8O89012 320 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Vti1aO89116 217 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 PklrP53657 574 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rgs9bpQ148R9 237 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ccdc127Q3TC33 260 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 PRAG1Q571I4 1179 aa11.48□□□□□ -0.57
Msh3-201ENSMUST00000022220 Bcar1Q61140 874 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms