RNA–Protein interactions for RNA: ENSMUST00000021864.7

Ssr1-201, Transcript of Translocon-associated protein subunit alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr1, Length 9,333 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-201ENSMUST00000021864 Gm3893E9Q1I1 302 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm5160F8VPN3 147 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Oog3Q3UWY1 500 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 H2afy2Q8CCK0 372 aaKnown RBP8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Ero1bQ8R2E9 467 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 NclnQ8VCM8 563 aaKnown RBP8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 PccaQ91ZA3 724 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Trpd52l3Q9CQ14 231 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Tssc4Q9JHE7 317 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Morc1Q9WVL5 950 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Zcchc7B1AX39 541 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Cyp4f40G3UW81 524 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pbxip1Q3TVI8 727 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 CtcfQ61164 736 aaKnown RBP8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pnma3Q8JZW8 466 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Champ1Q8K327 802 aaKnown RBP8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 BfarQ8R079 450 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 ArpinQ9D0A3 226 aa8.68□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Skint11A7XV14 364 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 A930018M24RikB7ZMY3 218 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pou6f1Q07916 301 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Fam228bQ497Q6 232 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 VclQ64727 1066 aaKnown RBP8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 PhkbQ7TSH2 1085 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Plekha8Q80W71 519 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Apol9bQ8C7I4 310 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Atxn7Q8R4I1 867 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Apol9aQ8VDU3 310 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Cep72Q9D3R3 646 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Tgm5Q9D7I9 724 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Tmem47Q9JJG6 181 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 AV320801A2AWL3 467 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm15023L7MUB4 467 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 PtpaP58389 323 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Spag6Q3V0U9 509 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Slc39a2G3X943 309 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 P01734 135 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Hoxb8P09632 243 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Cd40lgP27548 260 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Lrpap1P55302 360 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Ndufaf2Q59J78 168 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Sez6lQ6P1D5 963 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Ms4a5Q810P8 197 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Wdr35Q8BND3 1181 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Agr3Q8R3W7 165 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Anapc4Q91W96 807 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pcdhga4Q91XY4 930 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Mrpl40Q9Z2Q5 206 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Snap25P60879 206 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Alkbh8Q80Y20 664 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Psma8Q9CWH6 250 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Mfap3lQ9D3X9 409 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Nudt12Q9DCN1 462 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pcyt1aP49586 367 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Sarm1Q6PDS3 724 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Tdpoz3Q717B4 365 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Hat1Q8BY71 416 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Kcnv1Q8BZN2 503 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pnpt1Q8K1R3 783 aaKnown RBP8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Bud13Q8R149 637 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Cog8Q9JJA2 640 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm5415E9PXF3 478 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Serpinb6Q60854 378 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Kcna5Q61762 602 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Ddr2Q62371 854 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Thoc5Q8BKT7 683 aaKnown RBP8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Tor1aip2Q8BYU6 502 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Mtss1Q8R1S4 759 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Zfp566Q8VCI1 386 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Tnip2Q99JG7 430 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Ism1A2ATD1 454 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm3127E9Q9P5 263 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm3453K7N724 263 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Cdo1P60334 200 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 InscQ3HNM7 579 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Axdnd1Q3UZ57 424 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Fam160a1Q505K2 1081 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gba2Q69ZF3 918 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Panx2Q6IMP4 677 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Prrg3Q6PAQ9 231 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Olfr397Q8VEZ6 315 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 StrbpQ91WM1 672 aaKnown RBP8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Rprd1bQ9CSU0 326 aaKnown RBP8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Zscan12Q9Z1D7 501 aa8.67□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm28897A0A087WP44 222 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Gm20721E9Q2U8 318 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 C2P21180 760 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 BrafP28028 804 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Olfm3P63056 478 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Trpc1Q61056 793 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Dnm3Q8BZ98 863 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Ing3Q8VEK6 421 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Acsl4Q9QUJ7 711 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Kif20bQ80WE4 1774 aaKnown RBP8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 IgfalsP70389 603 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Hipk4Q3V016 616 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Afg1lQ3V384 480 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Slc9a1Q61165 820 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Q6GQU0 248 aa8.66□□□□□ -1.02
Ssr1-201ENSMUST00000021864 Pcdha3Q91Y16 942 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms