RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 Q3C1V9 767 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 FAM160B1Q5W0V3 765 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 FOXR1Q6PIV2 292 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 METTL7BQ6UX53 244 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 OR2W6PQ8NHA6 318 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
PHGDH-229ENST00000641891 SEPT1Q8WYJ6 367 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.18■□□□□ 0.5
PHGDH-229ENST00000641891 WNT8AQ9H1J5 351 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 KCNG1Q9UIX4 513 aa18.18■□□□□ 0.5
PHGDH-229ENST00000641891 CNTNAP2Q9UHC6 1331 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 ADCY3O60266 1144 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 CLSTN1O94985 981 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 TNFSF9P41273 254 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 HSDL1Q3SXM5 330 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 SLFN12LQ6IEE8 588 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 ZBTB33Q86T24 672 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 PRELID2Q8N945 189 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 FBXO41Q8TF61 875 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 KCNN1Q92952 543 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 UVRAGQ9P2Y5 699 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 MAFO75444 373 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-229ENST00000641891 ACO1P21399 889 aaKnown RBP18.17■□□□□ 0.5
PHGDH-229ENST00000641891 CTNNA1P35221 906 aaKnown RBP18.17■□□□□ 0.5
PHGDH-229ENST00000641891 MKRN4PQ13434 485 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-229ENST00000641891 LLGL1Q15334 1064 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 TMEM63BQ5T3F8 832 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 TTC19Q6DKK2 380 aaPredicted RBP18.17■□□□□ 0.5
PHGDH-229ENST00000641891 LRRC71Q8N4P6 559 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 CGRRF1Q99675 332 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 TMEM134Q9H6X4 195 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 CALCOCO1Q9P1Z2 691 aa18.17■□□□□ 0.5
PHGDH-229ENST00000641891 KIAA0391O15091 583 aaKnown RBP18.16■□□□□ 0.5
PHGDH-229ENST00000641891 CUL2Q13617 745 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 TTLL12Q14166 644 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-229ENST00000641891 SEL1L2Q5TEA6 688 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 TTC27Q6P3X3 843 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 ERO1BQ86YB8 467 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 PASD1Q8IV76 773 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 MCOLN2Q8IZK6 566 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 ZNF668Q96K58 619 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-229ENST00000641891 RBPJLQ9UBG7 517 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 ANAPC7Q9UJX3 599 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 NUB1Q9Y5A7 615 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 PCDHB2Q9Y5E7 798 aa18.16■□□□□ 0.5
PHGDH-229ENST00000641891 PHF2O75151 1096 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 SRGAP2CP0DJJ0 459 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 RRM1P23921 792 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 JAMLQ86YT9 394 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 CD302Q8IX05 232 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 FBXO16Q8IX29 292 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-229ENST00000641891 COPS5Q92905 334 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 ZBTB10Q96DT7 871 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 CYFIP2Q96F07 1278 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 GPR20Q99678 358 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 FAM114A2Q9NRY5 505 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 PCDHB4Q9Y5E5 795 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 PCDHA3Q9Y5H8 950 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 MROH7Q68CQ1 1323 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 ZBTB42B2RXF5 422 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 SHOX2O60902 331 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-229ENST00000641891 LDHAP00338 332 aaKnown RBP18.15■□□□□ 0.5
PHGDH-229ENST00000641891 TGFB3P10600 412 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 CTNNA2P26232 953 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 PTGIRP43119 386 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 CEP85LQ5SZL2 805 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 DUPD1Q68J44 220 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 TMEM270Q6UE05 265 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 TMC3Q7Z5M5 1100 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 MORC4Q8TE76 937 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 TRAPPC12Q8WVT3 735 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 UBLCP1Q8WVY7 318 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-229ENST00000641891 CDCA5Q96FF9 252 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 RAB17Q9H0T7 212 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 AZI2Q9H6S1 392 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 AGTPBP1Q9UPW5 1226 aa18.15■□□□□ 0.5
PHGDH-229ENST00000641891 SPDYE5A6NIY4 337 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 H0YGN5 161 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 RPS6KA5O75582 802 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 MAPK4P31152 587 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 NOP14P78316 857 aaKnown RBP18.14■□□□□ 0.49
PHGDH-229ENST00000641891 MOGSQ13724 837 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 WDR78Q5VTH9 848 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 DAB2IPQ5VWQ8 1189 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 ANKRD13AQ8IZ07 590 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 MAGOHBQ96A72 148 aaKnown RBP18.14■□□□□ 0.49
PHGDH-229ENST00000641891 LRRC45Q96CN5 670 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 ERP44Q9BS26 406 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 CCDC113Q9H0I3 377 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 NFS1Q9Y697 457 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 CLDN3O15551 220 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 FAM189A1O60320 539 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 MSCO60682 206 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 GJB1P08034 283 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 CLTAP09496 248 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 SCP2P22307 547 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 ATP1A2P50993 1020 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 LAMTOR4Q0VGL1 99 aa18.14■□□□□ 0.49
PHGDH-229ENST00000641891 CELF3Q5SZQ8 465 aaKnown RBP18.14■□□□□ 0.49
PHGDH-229ENST00000641891 SLC13A5Q86YT5 568 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms