RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ACAD10Q6JQN1 1059 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 TCP11Q8WWU5 503 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 CAVIN3Q969G5 261 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 MRPL4Q9BYD3 311 aaKnown RBP19.16■□□□□ 0.66
PHGDH-226ENST00000641756 CARD9Q9H257 536 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 AMACRQ9UHK6 382 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 GOLGA6BA6NDN3 693 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 RNF40O75150 1001 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 PRKCBP05771 671 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 EFNA5P52803 228 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 GJC2Q5T442 439 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-226ENST00000641756 ZPBP2Q6X784 338 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 FAM212AQ96EL1 285 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 GTF3C4Q9UKN8 822 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 TTC7AQ9ULT0 858 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-226ENST00000641756 DIS3Q9Y2L1 958 aaKnown RBP19.16■□□□□ 0.66
PHGDH-226ENST00000641756 UMODL1Q5DID0 1318 aa19.16■□□□□ 0.66
PHGDH-226ENST00000641756 MTA2O94776 668 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 CUL2Q13617 745 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 TTLL4Q14679 1199 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 CDCA2Q69YH5 1023 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 ARMCX2Q7L311 632 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 ZBTB8OSQ8IWT0 167 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 MORC4Q8TE76 937 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 FAM81BQ96LP2 452 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 ACO2Q99798 780 aaKnown RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 CNOT8Q9UFF9 292 aaKnown RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 PPME1Q9Y570 386 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 IGKV6-21A0A0C4DH24 114 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 GLTPD2A6NH11 291 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 TOM1L1O75674 476 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 POTEJP0CG39 1038 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 ACO1P21399 889 aaKnown RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 SSTR3P32745 418 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 MXD4Q14582 209 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 PHLDB2Q86SQ0 1253 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 DDX42Q86XP3 938 aaKnown RBP eCLIP19.15■□□□□ 0.663e-6■■■□□ 16.1
PHGDH-226ENST00000641756 BRSK2Q8IWQ3 736 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 CPA5Q8WXQ8 436 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 NLRP4Q96MN2 994 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 ZSWIM1Q9BR11 485 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 CELF4Q9BZC1 486 aaKnown RBP19.15■□□□□ 0.66
PHGDH-226ENST00000641756 CLEC11AQ9Y240 323 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 NUB1Q9Y5A7 615 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 PCDHB4Q9Y5E5 795 aa19.15■□□□□ 0.66
PHGDH-226ENST00000641756 FAM189A1O60320 539 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 CLCN3P51790 818 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 NOP14P78316 857 aaKnown RBP19.14■□□□□ 0.65
PHGDH-226ENST00000641756 MAPK6Q16659 721 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 TMEM270Q6UE05 265 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 UBL4BQ8N7F7 174 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 SHCBP1Q8NEM2 672 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 SMARCAD1Q9H4L7 1026 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 ERVK-5Q9HDB9 667 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 PCDHB2Q9Y5E7 798 aa19.14■□□□□ 0.65
PHGDH-226ENST00000641756 ASB14A6NK59 587 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 MIF4GDA9UHW6 222 aaKnown RBP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 TTI1O43156 1089 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 CFHP08603 1231 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 CLTAP09496 248 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 UNGP13051 313 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 CYP2C19P33261 490 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 IGBP1P78318 339 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 NNTQ13423 1086 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 NCOA4Q13772 614 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 HLTFQ14527 1009 aaKnown RBP eCLIP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 C2CD6Q53TS8 623 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 CDR2LQ86X02 465 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 RPS6KC1Q96S38 1066 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 RNPEPQ9H4A4 650 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 PNMA3Q9UL41 463 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 ERICH4A6NGS2 130 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 PDHXO00330 501 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 SPOPO43791 374 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 GAS2O43903 313 aaKnown RBP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 CST3P01034 146 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 MAP1SQ66K74 1059 aaPredicted RBP19.13■□□□□ 0.65
PHGDH-226ENST00000641756 EFCAB12Q6NXP0 572 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 GPRC5AQ8NFJ5 357 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 SLITRK6Q9H5Y7 841 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 FAM204AQ9H8W3 233 aa19.13■□□□□ 0.65
PHGDH-226ENST00000641756 B4GALT5O43286 388 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 LLGL2Q6P1M3 1020 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 PASD1Q8IV76 773 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 MCOLN2Q8IZK6 566 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 CCDC26Q8TAB7 109 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 CYFIP2Q96F07 1278 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 MTMR12Q9C0I1 747 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 UVRAGQ9P2Y5 699 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 INO80B-WBP1J3KQ70 363 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 ABLIM1O14639 778 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 HBP1O60381 514 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 ADORA2AP29274 412 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 ECHS1P30084 290 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 PEX5P50542 639 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 OSTNP61366 133 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 EXOC8Q8IYI6 725 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 CD101Q93033 1021 aa19.12■□□□□ 0.65
PHGDH-226ENST00000641756 EXOC4Q96A65 974 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms