RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ADCY3O60266 1144 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 PHF2O75151 1096 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 IREB2P48200 963 aaKnown RBP18.28■□□□□ 0.52
PHGDH-211ENST00000641213 DRP2Q13474 957 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 DHX34Q14147 1143 aaKnown RBP18.28■□□□□ 0.52
PHGDH-211ENST00000641213 KCTD16Q68DU8 428 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 DUPD1Q68J44 220 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 METTL7BQ6UX53 244 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 LRIG3Q6UXM1 1119 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 ZNF677Q86XU0 584 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 PRELID2Q8N945 189 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 ATP8B4Q8TF62 1192 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 CGRRF1Q99675 332 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 ERP44Q9BS26 406 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 TRIM31Q9BZY9 425 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHGDH-211ENST00000641213 CNTNAP2Q9UHC6 1331 aa18.28■□□□□ 0.52
PHGDH-211ENST00000641213 FAM187AA6NFU0 413 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 H0YGN5 161 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 BPIFB4P59827 614 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 MCOLN2Q8IZK6 566 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 SH2D3CQ8N5H7 860 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 APOBEC3GQ9HC16 384 aaKnown RBP18.27■□□□□ 0.52
PHGDH-211ENST00000641213 NFS1Q9Y697 457 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 EVPLQ92817 2033 aa18.27■□□□□ 0.52
PHGDH-211ENST00000641213 IVLP07476 585 aa18.27■□□□□ 0.51
PHGDH-211ENST00000641213 ACO1P21399 889 aaKnown RBP18.27■□□□□ 0.51
PHGDH-211ENST00000641213 CHRNA3P32297 505 aa18.27■□□□□ 0.51
PHGDH-211ENST00000641213 CUL2Q13617 745 aa18.27■□□□□ 0.51
PHGDH-211ENST00000641213 C1orf131Q8NDD1 294 aaKnown RBP18.27■□□□□ 0.51
PHGDH-211ENST00000641213 PRPF31Q8WWY3 499 aaKnown RBP18.27■□□□□ 0.51
PHGDH-211ENST00000641213 C18orf8Q96DM3 657 aa18.27■□□□□ 0.51
PHGDH-211ENST00000641213 CAPS2Q9BXY5 557 aa18.27■□□□□ 0.51
PHGDH-211ENST00000641213 ANK1P16157 1881 aa18.27■□□□□ 0.51
PHGDH-211ENST00000641213 TTLL13PA6NNM8 815 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 SOCS7O14512 581 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 ARIH2O95376 493 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 PTGIRP43119 386 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 SKOR1P84550 965 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 SEZ6Q53EL9 994 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 DNAJC21Q5F1R6 531 aaKnown RBP18.26■□□□□ 0.51
PHGDH-211ENST00000641213 CEP85LQ5SZL2 805 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 TMC3Q7Z5M5 1100 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 ERO1BQ86YB8 467 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 JAMLQ86YT9 394 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 OR5B17Q8NGF7 314 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 CPA5Q8WXQ8 436 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 AVENQ9NQS1 362 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-211ENST00000641213 CWC15Q9P013 229 aaKnown RBP18.26■□□□□ 0.51
PHGDH-211ENST00000641213 PCYOX1Q9UHG3 505 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 CYP1A1P04798 512 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-211ENST00000641213 PGK2P07205 417 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 IRAK1P51617 712 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 MTMR3Q13615 1198 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 FOXR1Q6PIV2 292 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 SLC13A5Q86YT5 568 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-211ENST00000641213 FAM167AQ96KS9 214 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 ATP6V1G3Q96LB4 118 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 FGD4Q96M96 766 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 AZI2Q9H6S1 392 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 TXNRD2Q9NNW7 524 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 ANAPC7Q9UJX3 599 aa18.26■□□□□ 0.51
PHGDH-211ENST00000641213 MROH7Q68CQ1 1323 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 TCRBV7S2A1N4TA0A589 114 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 CXCL11O14625 94 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 SLC25A27O95847 323 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 HARSP12081 509 aaKnown RBP18.25■□□□□ 0.51
PHGDH-211ENST00000641213 MAPK4P31152 587 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 RWDD2BP57060 319 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 TTC27Q6P3X3 843 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 ZPBP2Q6X784 338 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 UBLCP1Q8WVY7 318 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-211ENST00000641213 MAGOHBQ96A72 148 aaKnown RBP18.25■□□□□ 0.51
PHGDH-211ENST00000641213 TMBIM4Q9HC24 238 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 ZDHHC18Q9NUE0 388 aa18.25■□□□□ 0.51
PHGDH-211ENST00000641213 CLDN3O15551 220 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 MSCO60682 206 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CLTAP09496 248 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 MYBL1P10243 752 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 RRM1P23921 792 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CENPCQ03188 943 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 DHX9Q08211 1270 aaKnown RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 MOB2Q70IA6 237 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 OR2W6PQ8NHA6 318 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 BBXQ8WY36 941 aaPredicted RBP18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CYFIP2Q96F07 1278 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 TRIM11Q96F44 468 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 FMO2Q99518 471 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 GPR20Q99678 358 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 CCDC113Q9H0I3 377 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 RASAL2Q9UJF2 1139 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 PPME1Q9Y570 386 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 NUB1Q9Y5A7 615 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 PCDHB4Q9Y5E5 795 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 SPDYE5A6NIY4 337 aa18.24■□□□□ 0.51
PHGDH-211ENST00000641213 FAM189A1O60320 539 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms