RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 EXOC3O60645 756 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 CYP1A1P04798 512 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 HOXA13P31271 388 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 HHATQ5VTY9 493 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 SNRNP27Q8WVK2 155 aaKnown RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 ACSF2Q96CM8 615 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 INTS2Q9H0H0 1204 aaKnown RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 LRMDAQ9H2I8 198 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 TIAM2Q8IVF5 1701 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 PARP4Q9UKK3 1724 aaKnown RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GYG2O15488 501 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GLI3P10071 1580 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 MARK3P27448 753 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GCLCP48506 637 aaPredicted RBP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 FMO5P49326 533 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 EFTUD2Q15029 972 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 SBK1Q52WX2 424 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 FRMD5Q7Z6J6 570 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.63□□□□□ -0.07
SCARB2-227ENST00000640957 ADGRF4Q8IZF3 695 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 STMN2Q93045 179 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 ZNF653Q96CK0 615 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 TUBGCP5Q96RT8 1024 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 AGPAT1Q99943 283 aa14.63□□□□□ -0.07
SCARB2-227ENST00000640957 GPR75-ASB3A0A0A6YYF3 556 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 ANKRD62A6NC57 917 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 CCDC160A6NGH7 325 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 FAM47DPA6NHR8 397 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 PI4K2BG5E9Z4 385 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 CALUO43852 315 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-227ENST00000640957 TTLL1O95922 423 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 TMEM62Q0P6H9 643 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 PDIA5Q14554 519 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 SLC5A9Q2M3M2 681 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 OTOAQ7RTW8 1153 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 SLC47A2Q86VL8 602 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 LRRC6Q86X45 466 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 PPM1KQ8N3J5 372 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 EFCAB3Q8N7B9 438 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 NDNQ99608 321 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 GPR88Q9GZN0 384 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 TRABDQ9H4I3 376 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 LRRC4BQ9NT99 713 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 ETNK2Q9NVF9 386 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 HEY2Q9UBP5 337 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 DNM3Q9UQ16 869 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 ASB3Q9Y575 518 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 TGFB1I1O43294 461 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 OPHN1O60890 802 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 OR6B1O95007 311 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 ATF2P15336 505 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 ADRA1DP25100 572 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 SEPT7Q16181 437 aaKnown RBP14.62□□□□□ -0.07
SCARB2-227ENST00000640957 OLFML2BQ68BL8 750 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 MTHFD1LQ6UB35 978 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 DRAXINQ8NBI3 349 aaPredicted RBP14.62□□□□□ -0.07
SCARB2-227ENST00000640957 FAM161BQ96MY7 647 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 SPZ1Q9BXG8 430 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 SHCBP1LQ9BZQ2 653 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 LRRC27Q9C0I9 530 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 SYNGAP1Q96PV0 1343 aa14.62□□□□□ -0.07
SCARB2-227ENST00000640957 KITP10721 976 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 CETN2P41208 172 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 SLC12A3P55017 1021 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 RNF43Q68DV7 783 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 LVRNQ6Q4G3 990 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 LRRC74BQ6ZQY2 392 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 C4orf50Q6ZRC1 276 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 AGGF1Q8N302 714 aaeCLIP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 ABTB1Q969K4 478 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 RUNDC3BQ96NL0 473 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 SERPINB12Q96P63 405 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 CCDC88AQ3V6T2 1871 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 NPTXRO95502 500 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 IFNB1P01574 187 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 PLS3P13797 630 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 SERPINB3P29508 390 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 VHLP40337 213 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 MAPK6Q16659 721 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 BTNL9Q6UXG8 535 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 RINLQ6ZS11 566 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 ZNF564Q8TBZ8 553 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 DHX38Q92620 1227 aaKnown RBP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 CCDC127Q96BQ5 260 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 STOML1Q9UBI4 398 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 MARCOQ9UEW3 520 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 POLLQ9UGP5 575 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 CASZ1Q86V15 1759 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 NUP98P52948 1817 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 TXNDC9O14530 226 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 LIN7AO14910 233 aaPredicted RBP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 HNRNPRO43390 633 aaKnown RBP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 GDF11O95390 407 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 KDSRQ06136 332 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 USP6NLQ92738 828 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 SMC6Q96SB8 1091 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 RBM15Q96T37 977 aaKnown RBP eCLIP14.61□□□□□ -0.07
SCARB2-227ENST00000640957 STK33Q9BYT3 514 aa14.61□□□□□ -0.07
SCARB2-227ENST00000640957 JMJD4Q9H9V9 463 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms