RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 FRMD5Q7Z6J6 570 aa23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 NT5DC4Q86YG4 428 aa23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 CNOT6LQ96LI5 555 aaKnown RBP23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 CXCL16Q9H2A7 254 aa23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 PRO3102Q9H379 93 aa23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 RC3H2Q9HBD1 1191 aaKnown RBP23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 DERAQ9Y315 318 aa23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 C2CD2Q9Y426 696 aa23.38■■□□□ 1.33
TSPAN9-208ENST00000640568 GRXCR1A8MXD5 290 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 IKBKBO14920 756 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 MEFVO15553 781 aaPredicted RBP23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 TMEM191BP0C7N4 346 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 VAMP7P51809 220 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 TPM4P67936 248 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 DCAF17Q5H9S7 520 aaPredicted RBP23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 TCERG1LQ5VWI1 586 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 FIBCD1Q8N539 461 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 GSTCDQ8NEC7 633 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 FAM200AQ8TCP9 573 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 CACTINQ8WUQ7 758 aaKnown RBP23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 ANKRD36BP1Q96IX9 119 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 ZMAT2Q96NC0 199 aaKnown RBP23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 UBQLN1Q9UMX0 589 aaKnown RBP23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 COL4A6Q14031 1691 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 KIAA1671Q9BY89 1806 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 NLRC5Q86WI3 1866 aa23.37■■□□□ 1.33
TSPAN9-208ENST00000640568 A0A1W2PPC1 479 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 NFICP08651 508 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 WNT7BP56706 349 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 TFAMQ00059 246 aaKnown RBP23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 HSP90AA4PQ58FG1 418 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 FAM109BQ6ICB4 259 aaPredicted RBP23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 WDR49Q8IV35 697 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 BEST2Q8NFU1 509 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 TMC2Q8TDI7 906 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 PARD3BQ8TEW8 1205 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 PPP1R10Q96QC0 940 aaKnown RBP23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 CGRRF1Q99675 332 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 CBX8Q9HC52 389 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 PLAGL2Q9UPG8 496 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 GOLGA6L19H0YKK7 550 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 TNNC2P02585 160 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 RAB30Q15771 203 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 LMBRD2Q68DH5 695 aaPredicted RBP23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 DHX40Q8IX18 779 aaKnown RBP23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 EFCAB13Q8IY85 973 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 SAMSN1Q9NSI8 373 aaKnown RBP23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 FANCLQ9NW38 375 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 MSRAQ9UJ68 235 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 PCDHA11Q9Y5I1 949 aa23.36■■□□□ 1.33
TSPAN9-208ENST00000640568 LRRIQ3A6PVS8 624 aaPredicted RBP23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 ZC3H11AO75152 810 aaKnown RBP eCLIP23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 MTIF2P46199 727 aaKnown RBP23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 ENPEPQ07075 957 aa23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 TUSC3Q13454 348 aa23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 ANKRD20A12PQ8NF67 263 aa23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 POP1Q99575 1024 aaKnown RBP23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 COLQQ9Y215 455 aaPredicted RBP23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 R3HCC1Q9Y3T6 440 aaKnown RBP23.35■■□□□ 1.33
TSPAN9-208ENST00000640568 STX10O60499 249 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 CDK11BP21127 795 aaKnown RBP23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 AP3M2P53677 418 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 MARSP56192 900 aaKnown RBP23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 DUOXA2Q1HG44 320 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 PLEKHO2Q8TD55 490 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 C18orf25Q96B23 403 aaPredicted RBP23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 BORCS6Q96GS4 357 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 NRDE2Q9H7Z3 1164 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 MMRN2Q9H8L6 949 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 INTS13Q9NVM9 706 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 TUBGCP4Q9UGJ1 667 aa23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 MRPL42Q9Y6G3 142 aaKnown RBP23.34■■□□□ 1.33
TSPAN9-208ENST00000640568 CASTOR2A6NHX0 329 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 KCNJ18B7U540 433 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 DDHD2O94830 711 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 TRIM49P0CI25 452 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 TRIM49CP0CI26 452 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 CYP3A5P20815 502 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 DLG4P78352 724 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 KCNJ12Q14500 433 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 NCAPHQ15003 741 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 IQCB1Q15051 598 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 LUZP1Q86V48 1076 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 ZNF280BQ86YH2 543 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 SP7Q8TDD2 431 aaPredicted RBP23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 PBX4Q9BYU1 374 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 MTMR12Q9C0I1 747 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 AAASQ9NRG9 546 aa23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.33■■□□□ 1.33
TSPAN9-208ENST00000640568 LCHNA4D1U4 455 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 TPM2P07951 284 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 MYOGP15173 224 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 LAG3P18627 525 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 EEF1GP26641 437 aaKnown RBP23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 OR1G1P47890 313 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 ZBTB6Q15916 424 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 UROC1Q96N76 676 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 TMEM175Q9BSA9 504 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 CWH43Q9H720 699 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms