RNA–Protein interactions for RNA: ENST00000640393.1

RTTN-217, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,357 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-217ENST00000640393 GOLGA6L6A8MZA4 724 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 TEX33O43247 280 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 SGTAO43765 313 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 CTNND1O60716 968 aaKnown RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 ALDH2P05091 517 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 SLC6A2P23975 617 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 APOBEC3AP31941 199 aaPredicted RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 MAP2K6P52564 334 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 CHN2P52757 468 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 EFEMP1Q12805 493 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 ATAT1Q5SQI0 421 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 GPRIN1Q7Z2K8 1008 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 SYT12Q8IV01 421 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 NSUN6Q8TEA1 469 aaKnown RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 SH3RF3Q8TEJ3 882 aaPredicted RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 FAM193BQ96PV7 902 aaPredicted RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 CDK5RAP1Q96SZ6 601 aaKnown RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 ACO2Q99798 780 aaKnown RBP7.17□□□□□ -1.26
RTTN-217ENST00000640393 SLC12A5Q9H2X9 1139 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 SLAMF7Q9NQ25 335 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 FBXO34Q9NWN3 711 aa7.17□□□□□ -1.26
RTTN-217ENST00000640393 KLRG2A4D1S0 409 aaPredicted RBP7.16□□□□□ -1.26
RTTN-217ENST00000640393 DRGXA6NNA5 263 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 H3BUI4 141 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 GRM6O15303 877 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 PJA2O43164 708 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 MARCH6O60337 910 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 ITGB1P05556 798 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 HMGB1P09429 215 aaKnown RBP7.16□□□□□ -1.26
RTTN-217ENST00000640393 ATF3P18847 181 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 MALP21145 153 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 PHKA1P46020 1223 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 RNASE9P60153 205 aaKnown RBP7.16□□□□□ -1.26
RTTN-217ENST00000640393 NHLH2Q02577 135 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 RAB39AQ14964 217 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 R3HDM1Q15032 1099 aaKnown RBP7.16□□□□□ -1.26
RTTN-217ENST00000640393 ATP2B3Q16720 1220 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 MINDY4Q4G0A6 757 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 OTUD7BQ6GQQ9 843 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 PLXDC1Q8IUK5 500 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 TCEAL8Q8IYN2 117 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 MAGEB6Q8N7X4 407 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
RTTN-217ENST00000640393 AIFM3Q96NN9 605 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 CGRRF1Q99675 332 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 KMT5AQ9NQR1 393 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 MAN1C1Q9NR34 630 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 ABCF2Q9UG63 623 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 NR2E3Q9Y5X4 410 aa7.16□□□□□ -1.26
RTTN-217ENST00000640393 KRTAP9-7A8MTY7 169 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 SCAF4O95104 1147 aaKnown RBP7.15□□□□□ -1.26
RTTN-217ENST00000640393 CD1AP06126 327 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 TLE1Q04724 770 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 CDSNQ15517 529 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 FLYWCH1Q4VC44 716 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 CXorf57Q6NSI4 855 aaKnown RBP7.15□□□□□ -1.26
RTTN-217ENST00000640393 HEATR3Q7Z4Q2 680 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 SPRED1Q7Z699 444 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 CPT1CQ8TCG5 803 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 C1GALT1C1Q96EU7 318 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 NDC1Q9BTX1 674 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 KRTAP3-1Q9BYR8 98 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 CALCOCO1Q9P1Z2 691 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 CLCA2Q9UQC9 943 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 POLHQ9Y253 713 aa7.15□□□□□ -1.26
RTTN-217ENST00000640393 PRSS23O95084 383 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 ACRV1P26436 265 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 BUD31P41223 144 aaPredicted RBP7.14□□□□□ -1.27
RTTN-217ENST00000640393 NOGQ13253 232 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 LLGL1Q15334 1064 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 THEMIS2Q5TEJ8 643 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 TSHZ3Q63HK5 1081 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 B3GNT9Q6UX72 402 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 SEM1Q6ZVN7 128 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 ZBTB34Q8NCN2 500 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 IL17DQ8TAD2 202 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 TBC1D15Q8TC07 691 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 PLEKHG4BQ96PX9 1271 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 TAAR9Q96RI9 348 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 LMBRD1Q9NUN5 540 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 TRPM5Q9NZQ8 1165 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 TSC22D4Q9Y3Q8 395 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 USP15Q9Y4E8 981 aaPredicted RBP7.14□□□□□ -1.27
RTTN-217ENST00000640393 PCDHA1Q9Y5I3 950 aa7.14□□□□□ -1.27
RTTN-217ENST00000640393 CDHR4A6H8M9 788 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 GOLGA6CA6NDK9 693 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 GOLGA6BA6NDN3 693 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 VSTM5A8MXK1 200 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 PRRG2O14669 202 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 ZNF185O15231 689 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 AMHP03971 560 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 GOLGA6DP0CG33 693 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 MGAT1P26572 445 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 DGCR2P98153 550 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 DCAF17Q5H9S7 520 aaPredicted RBP7.13□□□□□ -1.27
RTTN-217ENST00000640393 TTC8Q8TAM2 541 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 C1orf43Q9BWL3 253 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 TEX101Q9BY14 249 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 GOLGA6AQ9NYA3 693 aa7.13□□□□□ -1.27
RTTN-217ENST00000640393 STAP2Q9UGK3 403 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms