RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PRCCQ92733 491 aaPredicted RBP17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 MRIQ9BWK5 157 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 NSRP1Q9H0G5 558 aaKnown RBP17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 STMN4Q9H169 189 aaPredicted RBP17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 RAVER2Q9HCJ3 691 aaKnown RBP17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 RAB20Q9NX57 234 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 SLC12A4Q9UP95 1085 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 STK38LQ9Y2H1 464 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 ATRNL1Q5VV63 1379 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 P4HA2O15460 535 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 MGRN1O60291 552 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 BRAFP15056 766 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 ITIH4Q14624 930 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 SV2AQ7L0J3 742 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 LRRC19Q9H756 370 aa17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 AGO4Q9HCK5 861 aaKnown RBP17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 A1CFQ9NQ94 594 aaKnown RBP17.66■□□□□ 0.42
HNRNPU-228ENST00000640306 TESPA1A2RU30 521 aaPredicted RBP17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 A8MUI8 341 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 CFHP08603 1231 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 GBP1P32455 592 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 NPTX2P47972 431 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 MYBPC2Q14324 1141 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 ZFYVE27Q5T4F4 411 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 SPOPLQ6IQ16 392 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 ACAD10Q6JQN1 1059 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 FBXL13Q8NEE6 735 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 DDX1Q92499 740 aaKnown RBP17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 TAAR1Q96RJ0 339 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 TBX20Q9UMR3 447 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 GSTTP1A0A1W2PQM5 241 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 GRIN3BO60391 1043 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 RALAP11233 206 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 EZRP15311 586 aaKnown RBP17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 MUTP22033 750 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 TRAF1Q13077 416 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 STYK1Q6J9G0 422 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 FAM47EQ6ZV65 393 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 BSNDQ8WZ55 320 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 P3H4Q92791 437 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 STAMBPL1Q96FJ0 436 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 ECT2Q9H8V3 914 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 UVRAGQ9P2Y5 699 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 HERC5Q9UII4 1024 aaKnown RBP17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 MCM8Q9UJA3 840 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 ANAPC5Q9UJX4 755 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 USP15Q9Y4E8 981 aaPredicted RBP17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 MTA2O94776 668 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 ATF2P15336 505 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 SNF8Q96H20 258 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 FAM213AQ9BRX8 229 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 TELO2Q9Y4R8 837 aa17.65■□□□□ 0.42
HNRNPU-228ENST00000640306 FSCN2O14926 492 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 CD58P19256 250 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 TNFAIP8L3Q5GJ75 292 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 TRMT10CQ7L0Y3 403 aaKnown RBP17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 ZNF341Q9BYN7 854 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 MROH7Q68CQ1 1323 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 RGPD3A6NKT7 1758 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 RGPD4Q7Z3J3 1758 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 TTC4O95801 387 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 IVDP26440 423 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 KAZNQ674X7 775 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 TMEM161BQ8NDZ6 487 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 CNKSR1Q969H4 720 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 BICD1Q96G01 975 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 C11orf70Q9BRQ4 267 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 TMEM109Q9BVC6 243 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 KMT5AQ9NQR1 393 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 NINJ2Q9NZG7 142 aa17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 PPP1R1BQ9UD71 204 aaPredicted RBP17.64■□□□□ 0.41
HNRNPU-228ENST00000640306 RBBP6Q7Z6E9 1792 aaKnown RBP17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 ZNF536O15090 1300 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 PI4K2BG5E9Z4 385 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 IGF2BP3O00425 579 aaKnown RBP eCLIP17.63■□□□□ 0.412e-8■□□□□ 8.3
HNRNPU-228ENST00000640306 HNRNPDLO14979 420 aaKnown RBP17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 CCNE2O96020 404 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 CAP2P40123 477 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 CLEC16AQ2KHT3 1053 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 MFSD5Q6N075 450 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 SLC39A4Q6P5W5 647 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 TGS1Q96RS0 853 aaKnown RBP17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 TMEM8AQ9HCN3 771 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 ZNF70Q9UC06 446 aaPredicted RBP17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 SPAG7O75391 227 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 NPM3O75607 178 aaKnown RBP17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 STX2P32856 288 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 NCALDP61601 193 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 MYO1EQ12965 1108 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 WLSQ5T9L3 541 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 ANKS1BQ7Z6G8 1248 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 MORC4Q8TE76 937 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 RMDN2Q96LZ7 410 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 WHRNQ9P202 907 aa17.63■□□□□ 0.41
HNRNPU-228ENST00000640306 SPDYE2BA6NHP3 402 aa17.62■□□□□ 0.41
HNRNPU-228ENST00000640306 SPDYE6P0CI01 402 aa17.62■□□□□ 0.41
HNRNPU-228ENST00000640306 ELF1P32519 619 aa17.62■□□□□ 0.41
HNRNPU-228ENST00000640306 DMP1Q13316 513 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms