RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	KCNJ6	P48051	423 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	CDK17	Q00537	523 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	KLHL30	Q0D2K2	578 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	ASIC2	Q16515	512 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	DUOXA2	Q1HG44	320 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	GLIPR1L2	Q4G1C9	344 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	JADE1	Q6IE81	842 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	TRAPPC11	Q7Z392	1133 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	WDR49	Q8IV35	697 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	REXO1L1P	Q8IX06	675 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	HELQ	Q8TDG4	1101 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	DHX38	Q92620	1227 aa	Known RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	SYN2	Q92777	582 aa	Predicted RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	APOL6	Q9BWW8	343 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	TRIM6	Q9C030	488 aa	Predicted RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	DEF6	Q9H4E7	631 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	HAUS4	Q9H6D7	363 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	ST3GAL5	Q9UNP4	418 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	TRPV2	Q9Y5S1	764 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	ABL1	P00519	1130 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	SERPING1	P05155	500 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	NFIC	P08651	508 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	CCDC175	P0C221	793 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	USP8	P40818	1118 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	STAT1	P42224	750 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	PTK2	Q05397	1052 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	GFPT1	Q06210	699 aa	Predicted RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	PCBP1	Q15365	356 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	KREMEN1	Q96MU8	473 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	NT5C1B	Q96P26	610 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	ARID3A	Q99856	593 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	RNF39	Q9H2S5	420 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	NXF3	Q9H4D5	531 aa	Known RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	AGO3	Q9H9G7	860 aa	Known RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	LZTFL1	Q9NQ48	299 aa		11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	REXO2	Q9Y3B8	237 aa	Known RBP	11.29	□□□□□ -0.6
NECAP1-223	ENST00000640091	MROH7	Q68CQ1	1323 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	FAM170A	A1A519	330 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZNF263	O14978	683 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZSCAN12	O43309	604 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	AKR1B10	O60218	316 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	EVI5	O60447	810 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	TMEM191B	P0C7N4	346 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	SOX5	P35711	763 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	GRM5	P41594	1212 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	MGAT3	Q09327	533 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	PTK7	Q13308	1070 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	NCOA4	Q13772	614 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	SURF1	Q15526	300 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	WDR44	Q5JSH3	913 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	UBXN11	Q5T124	520 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZNF618	Q5T7W0	954 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	TWF2	Q6IBS0	349 aa	Known RBP	11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZNF710	Q8N1W2	664 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	APOBEC3G	Q9HC16	384 aa	Known RBP	11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ACP6	Q9NPH0	428 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ADAMTS1	Q9UHI8	967 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	PHF24	Q9UPV7	400 aa		11.28	□□□□□ -0.6
NECAP1-223	ENST00000640091	ARVCF	O00192	962 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	IL18RAP	O95256	599 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	KRT19	P08727	400 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	GHR	P10912	638 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	AXL	P30530	894 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	CLCN1	P35523	988 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	CYLC1	P35663	651 aa	Predicted RBP	11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	GUCY2F	P51841	1108 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	KIF11	P52732	1056 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	MYL6	P60660	151 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	DCAF4L1	Q3SXM0	396 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	RPAIN	Q86UA6	219 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	CCDC170	Q8IYT3	715 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	CCDC94	Q9BW85	323 aa	Predicted RBP	11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	KCND1	Q9NSA2	647 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	KLK14	Q9P0G3	267 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	MYO6	Q9UM54	1294 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	NUB1	Q9Y5A7	615 aa		11.27	□□□□□ -0.6
NECAP1-223	ENST00000640091	UMODL1	Q5DID0	1318 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091		A0A0U1RQG5	324 aa	Predicted RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	DNM1L	O00429	736 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	TNNC2	P02585	160 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	IBSP	P21815	317 aa	Predicted RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	CD52	P31358	61 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	LBX1	P52954	281 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	AP3M2	P53677	418 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	MFAP3	P55082	362 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	PTPN11	Q06124	597 aa	Predicted RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	TRPC3	Q13507	836 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	TRIM71	Q2Q1W2	868 aa	Known RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	ASTE1	Q2TB18	679 aa	Predicted RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	GLRA4	Q5JXX5	417 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	SLC43A3	Q8NBI5	491 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	ANKRD36BP1	Q96IX9	119 aa		11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	ZMAT2	Q96NC0	199 aa	Known RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	IRX2	Q9BZI1	471 aa	Predicted RBP	11.27	□□□□□ -0.61
NECAP1-223	ENST00000640091	ASB7	Q9H672	318 aa		11.27	□□□□□ -0.61

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