RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 GIT1Q9Y2X7 761 aa6.95□□□□□ -1.3
PRKCH-228ENST00000640011 PRG3Q9Y2Y8 225 aaPredicted RBP6.95□□□□□ -1.3
PRKCH-228ENST00000640011 COL4A3BPQ9Y5P4 624 aa6.95□□□□□ -1.3
PRKCH-228ENST00000640011 TAF6LQ9Y6J9 622 aa6.95□□□□□ -1.3
PRKCH-228ENST00000640011 OTOGLQ3ZCN5 2332 aa6.95□□□□□ -1.3
PRKCH-228ENST00000640011 DCDC2BA2VCK2 349 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 GOLGA8AA7E2F4 631 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 GOLGA8BA8MQT2 603 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 MSH4O15457 936 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 CHMP2AO43633 222 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 IGHDP01880 384 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 TGM1P22735 817 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 CNR2P34972 360 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 CCR3P51677 355 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 PSMC5P62195 406 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 IRX6P78412 446 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 AKAP17AQ02040 695 aaKnown RBP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 DSC1Q08554 894 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 ELAVL2Q12926 359 aaKnown RBP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 DRP2Q13474 957 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 PPM1LQ5SGD2 360 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 FUT10Q6P4F1 479 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 C1orf228Q6PIY5 440 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 PARM1Q6UWI2 310 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 MIER3Q7Z3K6 550 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 GRASPQ7Z6J2 395 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 PALB2Q86YC2 1186 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 FEZF2Q8TBJ5 459 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 DNASE1L2Q92874 299 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 FGF13Q92913 245 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 CCDC136Q96JN2 1154 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 CEP89Q96ST8 783 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 TRIM6Q9C030 488 aaPredicted RBP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 DNAAF2Q9NVR5 837 aaKnown RBP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 GDE1Q9NZC3 331 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 ANGPTL2Q9UKU9 493 aa6.94□□□□□ -1.3
PRKCH-228ENST00000640011 SF3B1O75533 1304 aaKnown RBP eCLIP6.94□□□□□ -1.3
PRKCH-228ENST00000640011 ARL5CA6NH57 179 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 SLC27A2O14975 620 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 B4GALT3O60512 393 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 LILRA1O75019 489 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 TADA2AO75478 443 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 ECI2O75521 394 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 PSMD10O75832 226 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 C8AP07357 584 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 HMGB1P09429 215 aaKnown RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 HOXA11P31270 313 aaPredicted RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 ADD1P35611 737 aaKnown RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 MLH1P40692 756 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 SHC2P98077 582 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 FGD1P98174 961 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 POU5F1BQ06416 359 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 GRIK3Q13003 919 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 USP4Q13107 963 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 NR5A1Q13285 461 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 KRT32Q14532 448 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 MXD4Q14582 209 aaPredicted RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 NECTIN1Q15223 517 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 CSRP2Q16527 193 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 UGCGQ16739 394 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 Q4G0T1 1027 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 PPP1R26Q5T8A7 1209 aaPredicted RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 IL31Q6EBC2 164 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 MOXD1Q6UVY6 613 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 TPRG1Q6ZUI0 275 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 DHX32Q7L7V1 743 aaKnown RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 OTUD6AQ7L8S5 288 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 TAS1R1Q7RTX1 841 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 RAB11FIP4Q86YS3 637 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 ANKMY2Q8IV38 441 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 SLC5A5Q92911 643 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 LENG9Q96B70 501 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 MSANTD3Q96H12 275 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 TTPALQ9BTX7 342 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 LRRC2Q9BYS8 371 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 CSRNP2Q9H175 543 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 UNC45AQ9H3U1 944 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 CYLDQ9NQC7 956 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 FBXW11Q9UKB1 542 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 IPPQ9Y573 584 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 CEP250Q9BV73 2442 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 ACACBO00763 2458 aa6.93□□□□□ -1.3
PRKCH-228ENST00000640011 TPRP12270 2363 aaKnown RBP6.93□□□□□ -1.3
PRKCH-228ENST00000640011 CYP3A7-CYP3A51PA0A087WV96 503 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 J3QL48 77 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 PRPF3O43395 683 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 LRRN2O75325 713 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 STAU1O95793 577 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 P4HBP07237 508 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SPATA31D3P0C874 917 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SRGAP2CP0DJJ0 459 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 CYP3A7P24462 503 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 QARSP47897 775 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SCNN1GP51170 649 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 AFF1P51825 1210 aaKnown RBP6.92□□□□□ -1.3
PRKCH-228ENST00000640011 LIMK1P53667 647 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 SPEM2Q0P670 501 aa6.92□□□□□ -1.3
PRKCH-228ENST00000640011 DPYDQ12882 1025 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms