RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 CACNG4Q9UBN1 327 aa19.34■□□□□ 0.69
PTPN11-207ENST00000639857 NR2E1Q9Y466 385 aa19.34■□□□□ 0.69
PTPN11-207ENST00000639857 TRAPPC3O43617 180 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 CUTAO60888 179 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 B3GAT3O94766 335 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 RPL9P32969 192 aaKnown RBP19.33■□□□□ 0.68
PTPN11-207ENST00000639857 HERC4Q5GLZ8 1057 aaPredicted RBP19.33■□□□□ 0.68
PTPN11-207ENST00000639857 ATAT1Q5SQI0 421 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 RARS2Q5T160 578 aaKnown RBP19.33■□□□□ 0.68
PTPN11-207ENST00000639857 FAM171A1Q5VUB5 890 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 RNF135Q8IUD6 432 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 KCNG4Q8TDN1 519 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 RABGGTAQ92696 567 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 LRRC27Q9C0I9 530 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 PLEKHA4Q9H4M7 779 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 OLFML3Q9NRN5 406 aa19.33■□□□□ 0.68
PTPN11-207ENST00000639857 GPR37L1O60883 481 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 HARSP12081 509 aaKnown RBP19.32■□□□□ 0.68
PTPN11-207ENST00000639857 FGFR3P22607 806 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 MATR3P43243 847 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTPN11-207ENST00000639857 CLCNKBP51801 687 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 SLC10A6Q3KNW5 377 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 RTP2Q5QGT7 225 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 GPR149Q86SP6 731 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 HASPINQ8TF76 798 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 DNAJC19Q96DA6 116 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 ZMAT2Q96NC0 199 aaKnown RBP19.32■□□□□ 0.68
PTPN11-207ENST00000639857 APOL5Q9BWW9 433 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 TNMDQ9H2S6 317 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 MAN1C1Q9NR34 630 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 CFAP45Q9UL16 551 aa19.32■□□□□ 0.68
PTPN11-207ENST00000639857 A0A087X0B3 334 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 A0A0B4J269 797 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 FRMD3A2A2Y4 597 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 MYMKA6NI61 221 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 SPDYE4A6NLX3 237 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 OGTO15294 1046 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 FAM189A1O60320 539 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 PPP1R37O75864 691 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 NMT1P30419 496 aaKnown RBP19.31■□□□□ 0.68
PTPN11-207ENST00000639857 POU5F1Q01860 360 aaKnown RBP19.31■□□□□ 0.68
PTPN11-207ENST00000639857 SOX4Q06945 474 aaPredicted RBP19.31■□□□□ 0.68
PTPN11-207ENST00000639857 ALCAMQ13740 583 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 TMEM31Q5JXX7 168 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 DYMQ7RTS9 669 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 ZNF720Q7Z2F6 126 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 SFR1Q86XK3 245 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 B3GALT6Q96L58 329 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 HAPLN2Q9GZV7 340 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 POMKQ9H5K3 350 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 TFIP11Q9UBB9 837 aaKnown RBP19.31■□□□□ 0.68
PTPN11-207ENST00000639857 USTQ9Y2C2 406 aa19.31■□□□□ 0.68
PTPN11-207ENST00000639857 TTC26A0AVF1 554 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 PODXLO00592 558 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 MEFVO15553 781 aaPredicted RBP19.3■□□□□ 0.68
PTPN11-207ENST00000639857 XPOTO43592 962 aaKnown RBP19.3■□□□□ 0.68
PTPN11-207ENST00000639857 ADRB2P07550 413 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 CXCL8P10145 99 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 PPP2R3AQ06190 1150 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 PSMD5Q16401 504 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 CD302Q8IX05 232 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 C12orf76Q8N812 135 aaPredicted RBP19.3■□□□□ 0.68
PTPN11-207ENST00000639857 LNX1Q8TBB1 728 aaPredicted RBP19.3■□□□□ 0.68
PTPN11-207ENST00000639857 RPGRIP1Q96KN7 1286 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 STRA6Q9BX79 667 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 MAGEF1Q9HAY2 307 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 GOLGA2P5Q9HBQ8 144 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 ZDHHC7Q9NXF8 308 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 EXOC7Q9UPT5 735 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 STYXL1Q9Y6J8 313 aa19.3■□□□□ 0.68
PTPN11-207ENST00000639857 SYN3O14994 580 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 TGM5O43548 720 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 CYP3A5P20815 502 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 E2F4Q16254 413 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 LILRA6Q6PI73 481 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 PRSS55Q6UWB4 352 aaPredicted RBP19.29■□□□□ 0.68
PTPN11-207ENST00000639857 CD300LGQ6UXG3 332 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 TMC5Q6UXY8 1006 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 CEP57Q86XR8 500 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 IQUBQ8NA54 791 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 C3orf58Q8NDZ4 430 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 MSTO1Q9BUK6 570 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 MRPL44Q9H9J2 332 aaKnown RBP19.29■□□□□ 0.68
PTPN11-207ENST00000639857 RPF1Q9H9Y2 349 aaKnown RBP19.29■□□□□ 0.68
PTPN11-207ENST00000639857 MTRRQ9UBK8 725 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 UBQLN1Q9UMX0 589 aaKnown RBP19.29■□□□□ 0.68
PTPN11-207ENST00000639857 BACE2Q9Y5Z0 518 aa19.29■□□□□ 0.68
PTPN11-207ENST00000639857 PRR33A8MZF0 331 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 LRPAP1P30533 357 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 AMPD3Q01432 767 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 PKP1Q13835 747 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 POSTNQ15063 836 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 ZC2HC1CQ53FD0 456 aaPredicted RBP19.28■□□□□ 0.68
PTPN11-207ENST00000639857 AXDND1Q5T1B0 1012 aaPredicted RBP19.28■□□□□ 0.68
PTPN11-207ENST00000639857 CNNM4Q6P4Q7 775 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 SLC39A4Q6P5W5 647 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 CCDC149Q6ZUS6 474 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms