RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CLCN3P51790 818 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 WNT7BP56706 349 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 NLRP11P59045 1033 aaKnown RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 ACVR2BQ13705 512 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 ZBTB41Q5SVQ8 909 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 PRAMEF19Q5SWL8 479 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 MORN1Q5T089 497 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 NOP9Q86U38 636 aaKnown RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 RNF149Q8NC42 400 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 TSEN2Q8NCE0 465 aaKnown RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 HELQQ8TDG4 1101 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 PSPC1Q8WXF1 523 aaKnown RBP16.22■□□□□ 0.19
TRIM3-215ENST00000639856 PASKQ96RG2 1323 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 RAB20Q9NX57 234 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 FLRT1Q9NZU1 646 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 PPME1Q9Y570 386 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 STYXL1Q9Y6J8 313 aa16.22■□□□□ 0.19
TRIM3-215ENST00000639856 DDX3YO15523 660 aaKnown RBP16.21■□□□□ 0.19
TRIM3-215ENST00000639856 CYP26A1O43174 497 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 SART1O43290 800 aaKnown RBP16.21■□□□□ 0.19
TRIM3-215ENST00000639856 PIGRP01833 764 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 SLC10A3P09131 477 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 GZMAP12544 262 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 CHRNB2P17787 502 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 PRPF4BQ13523 1007 aaKnown RBP16.21■□□□□ 0.19
TRIM3-215ENST00000639856 ALS2CLQ60I27 953 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 SV2AQ7L0J3 742 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 IFNL1Q8IU54 200 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 RHPN2Q8IUC4 686 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 EIF1ADQ8N9N8 165 aaKnown RBP16.21■□□□□ 0.19
TRIM3-215ENST00000639856 TAS1R2Q8TE23 839 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRIM3-215ENST00000639856 EMID1Q96A84 441 aaPredicted RBP16.21■□□□□ 0.19
TRIM3-215ENST00000639856 ELMO3Q96BJ8 720 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 NT5C1BQ96P26 610 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 CARD9Q9H257 536 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 ABHD16BQ9H3Z7 469 aa16.21■□□□□ 0.19
TRIM3-215ENST00000639856 CCDC66A2RUB6 948 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 EXTL3O43909 919 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 C22orf31O95567 290 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 INSRRP14616 1297 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 GPC5P78333 572 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 EFCAB12Q6NXP0 572 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 GOLGA6L1Q8N7Z2 621 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 TCP11Q8WWU5 503 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 PCDHB18PQ96TA0 734 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 C16orf70Q9BSU1 422 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 CCDC113Q9H0I3 377 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.18
TRIM3-215ENST00000639856 AGO2Q9UKV8 859 aaKnown RBP16.21■□□□□ 0.18
TRIM3-215ENST00000639856 FAM170AA1A519 330 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 FAM153BP0C7A2 387 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 FAM153CQ494X1 144 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 DCAF12L1Q5VU92 463 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 LMBRD2Q68DH5 695 aaPredicted RBP16.2■□□□□ 0.18
TRIM3-215ENST00000639856 CDCA2Q69YH5 1023 aaPredicted RBP16.2■□□□□ 0.18
TRIM3-215ENST00000639856 CRELD2Q6UXH1 353 aaPredicted RBP16.2■□□□□ 0.18
TRIM3-215ENST00000639856 SLC47A2Q86VL8 602 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 MREGQ8N565 214 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 WHAMMQ8TF30 809 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 NLRP4Q96MN2 994 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 ZIC5Q96T25 663 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 SH3GL2Q99962 352 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 DDX47Q9H0S4 455 aaKnown RBP16.2■□□□□ 0.18
TRIM3-215ENST00000639856 SLITRK6Q9H5Y7 841 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 CTTNBP2NLQ9P2B4 639 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 FAM153AQ9UHL3 310 aa16.2■□□□□ 0.18
TRIM3-215ENST00000639856 ZNF233A6NK53 670 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 FAM155AB1AL88 458 aaPredicted RBP16.19■□□□□ 0.18
TRIM3-215ENST00000639856 BHMG1C9JSJ3 638 aaPredicted RBP16.19■□□□□ 0.18
TRIM3-215ENST00000639856 GAS2O43903 313 aaKnown RBP16.19■□□□□ 0.18
TRIM3-215ENST00000639856 MSCO60682 206 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 HSF2BPO75031 334 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 HARSP12081 509 aaKnown RBP16.19■□□□□ 0.18
TRIM3-215ENST00000639856 MAP2K5Q13163 448 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 MXD4Q14582 209 aaPredicted RBP16.19■□□□□ 0.18
TRIM3-215ENST00000639856 TRADDQ15628 312 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 CCL14Q16627 93 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 SEZ6Q53EL9 994 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 C11orf63Q6NUN7 778 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 C17orf99Q6UX52 265 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 LENG1Q96BZ8 264 aaPredicted RBP16.19■□□□□ 0.18
TRIM3-215ENST00000639856 MSTO1Q9BUK6 570 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 KIAA1586Q9HCI6 787 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 ALG6Q9Y672 507 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 A0A0B4J269 797 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 OPA1O60313 960 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 FGGP02679 453 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 MMP3P08254 477 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 MMEP08473 750 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 ITGA4P13612 1032 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 CYP11B1P15538 503 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 SCP2P22307 547 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 FMO1Q01740 532 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 OR6J1Q8NGC5 347 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 ACP6Q9NPH0 428 aa16.19■□□□□ 0.18
TRIM3-215ENST00000639856 PTPRJQ12913 1337 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms