RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	TUSC3	Q13454	348 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	RTN1	Q16799	776 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	DGKK	Q5KSL6	1271 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	CDR2L	Q86X02	465 aa	Predicted RBP	13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	RDM1	Q8NG50	284 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	DEPDC1B	Q8WUY9	529 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	CCDC51	Q96ER9	411 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	C6orf50	Q9HD87	102 aa		13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	RBM8A	Q9Y5S9	174 aa	Known RBP	13.04	□□□□□ -0.32
PAX6-238	ENST00000638755	ADAMTS20	P59510	1910 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	ARNTL	O00327	626 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PRRG1	O14668	218 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	ZNF197	O14709	1029 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PSMD10	O75832	226 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	NPTXR	O95502	500 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PSMC5	P62195	406 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	NUCB1	Q02818	461 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	CREB5	Q02930	508 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	ELAVL2	Q12926	359 aa	Known RBP	13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PON2	Q15165	354 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	TXNDC11	Q6PKC3	985 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	APOA5	Q6Q788	366 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PDZD4	Q76G19	769 aa	Predicted RBP	13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	RTL10	Q7L3V2	364 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PDZD3	Q86UT5	571 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	MFSD6L	Q8IWD5	586 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	YAF2	Q8IY57	180 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	FAM200A	Q8TCP9	573 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	CEP170P1	Q96L14	293 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	ZMYND12	Q9H0C1	365 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	NCAN	O14594	1321 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	PDCD11	Q14690	1871 aa	Known RBP	13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	VWA8	A3KMH1	1905 aa		13.03	□□□□□ -0.32
PAX6-238	ENST00000638755	SPECC1L-ADORA2A	F8WAN1	911 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	CAVIN2	O95810	425 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	GJA1	P17302	382 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	CHML	P26374	656 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	ELF1	P32519	619 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	MLLT6	P55198	1093 aa	Predicted RBP	13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	PLK5	Q496M5	336 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	CYP4A22	Q5TCH4	519 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	C1orf228	Q6PIY5	440 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	FERMT3	Q86UX7	667 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	SGMS1	Q86VZ5	419 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	SMC5	Q8IY18	1101 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	MSANTD3	Q96H12	275 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	C8orf33	Q9H7E9	229 aa	Predicted RBP	13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	MTRR	Q9UBK8	725 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	KLK13	Q9UKR3	277 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	NEUROG3	Q9Y4Z2	214 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	LAMA5	O15230	3695 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	FREM2	Q5SZK8	3169 aa		13.02	□□□□□ -0.33
PAX6-238	ENST00000638755	ESYT2	A0FGR8	921 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	LNP1	A1A4G5	178 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	ARHGEF37	A1IGU5	675 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	EIF4E1B	A6NMX2	242 aa	Known RBP	13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	HEPACAM2	A8MVW5	462 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	ASAP2	O43150	1006 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	B4GALT5	O43286	388 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	EDIL3	O43854	480 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	SEC24B	O95487	1268 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	ARF4	P18085	180 aa	Predicted RBP	13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	CSRP1	P21291	193 aa	Known RBP	13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	RFC5	P40937	340 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	ARPP19	P56211	112 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	PTEN	P60484	403 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	SPIRE1	Q08AE8	756 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	PFKFB3	Q16875	520 aa	Predicted RBP	13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	UAP1L1	Q3KQV9	507 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	PKN3	Q6P5Z2	889 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	SLC27A1	Q6PCB7	646 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	GPIHBP1	Q8IV16	184 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	EXOC8	Q8IYI6	725 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	HS6ST3	Q8IZP7	471 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	DEFB124	Q8NES8	71 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	TCP11	Q8WWU5	503 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	ZC3H10	Q96K80	434 aa	Known RBP	13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	SLITRK6	Q9H5Y7	841 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	DHX33	Q9H6R0	707 aa	Known RBP	13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	SLC8A2	Q9UPR5	921 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	MSRB2	Q9Y3D2	182 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	GPSM3	Q9Y4H4	160 aa		13.01	□□□□□ -0.33
PAX6-238	ENST00000638755	MYBPHL	A2RUH7	354 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	GOLGA8A	A7E2F4	631 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	GOLGA8B	A8MQT2	603 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	SGSM2	O43147	1006 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	ZBTB43	O43298	467 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	MICAL2	O94851	1124 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	MYL4	P12829	197 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	GSPT1	P15170	499 aa	Known RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	FGFR3	P22607	806 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	IGFBP6	P24592	240 aa	Predicted RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	TKT	P29401	623 aa	Known RBP	13	□□□□□ -0.33
PAX6-238	ENST00000638755	GNA11	P29992	359 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	CTH	P32929	405 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	CCIN	Q13939	588 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	EMC2	Q15006	297 aa		13	□□□□□ -0.33
PAX6-238	ENST00000638755	PCBP1	Q15365	356 aa	Known RBP eCLIP	13	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms