RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 ZCWPW2Q504Y3 356 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 APOL4Q9BPW4 351 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 HMG20AQ9NP66 347 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 ATAD3AQ9NVI7 634 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 TNPO2O14787 897 aaKnown RBP13.77□□□□□ -0.21
UBE3A-228ENST00000638155 KCTD17Q8N5Z5 321 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 TRABDQ9H4I3 376 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 DPCR1Q3MIW9 517 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 DGKKQ5KSL6 1271 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.21
UBE3A-228ENST00000638155 MTHFD1LQ6UB35 978 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 PLEKHA5Q9HAU0 1116 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 TNNQ9UQP3 1299 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 PKP3Q9Y446 797 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 USP15Q9Y4E8 981 aaPredicted RBP13.77□□□□□ -0.21
UBE3A-228ENST00000638155 TRPM2O94759 1503 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 SMAPO00193 183 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 VHLP40337 213 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 WNT8AQ9H1J5 351 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 IP6K2Q9UHH9 426 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 MAN1B1Q9UKM7 699 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 PITPNM2Q9BZ72 1349 aa13.77□□□□□ -0.21
UBE3A-228ENST00000638155 A0A0B4J269 797 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ARF4P18085 180 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 TUBB3Q13509 450 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ZBTB10Q96DT7 871 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 DBNDD2Q9BQY9 259 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 AMNQ9BXJ7 453 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 C6orf62Q9GZU0 229 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 CAAP1Q9H8G2 361 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 KLHL3Q9UH77 587 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 GSTA3Q16772 222 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 FBXW10Q5XX13 1052 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 IFNEQ86WN2 208 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 RANBP17Q9H2T7 1088 aaKnown RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 IL1RL2Q9HB29 575 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 SLC9A2Q9UBY0 812 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 FLT4P35916 1363 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF667Q5HYK9 610 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ZBTB38Q8NAP3 1195 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 VAV3Q9UKW4 847 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 CDY2AQ9Y6F7 541 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 CDY1Q9Y6F8 540 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 RMND5BQ96G75 393 aaPredicted RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 FAM47E-STBD1D6RA91 191 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 GPC5P78333 572 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 TRIM65Q6PJ69 517 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 PGBD4Q96DM1 585 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 DDX50Q9BQ39 737 aaKnown RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ZMYM4Q5VZL5 1548 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 E7ENQ6 273 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 TBC1D12O60347 775 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ANXA11P50995 505 aaKnown RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 PPIDQ08752 370 aaKnown RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 ULK3Q6PHR2 472 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 VTA1Q9NP79 307 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 NDUFA13Q9P0J0 144 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 POLG2Q9UHN1 485 aa13.76□□□□□ -0.21
UBE3A-228ENST00000638155 MTO1Q9Y2Z2 717 aaKnown RBP13.76□□□□□ -0.21
UBE3A-228ENST00000638155 NRG3P56975 720 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 TRAP1Q12931 704 aaKnown RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ANKS6Q68DC2 871 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF594Q96JF6 807 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CD274Q9NZQ7 290 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 PRIM2P49643 509 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 NCAPHQ15003 741 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CHAMP1Q96JM3 812 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ECSITQ9BQ95 431 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ABCB5Q2M3G0 1257 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 C2CD6Q53TS8 623 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 WARSP23381 471 aaKnown RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 HOXD10P28358 340 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 SDC4P31431 198 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CNTN1Q12860 1018 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 KIAA0408Q6ZU52 694 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 TRPM8Q7Z2W7 1104 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 PACSIN1Q9BY11 444 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 YTHDC2Q9H6S0 1430 aaKnown RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CHI3L1P36222 383 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 SUPT20HL1Q3ZLR7 823 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CC2D1AQ6P1N0 951 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CUL7Q14999 1698 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 BTN3A2P78410 334 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 LRRC41Q15345 812 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF57Q68EA5 555 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 GSPT2Q8IYD1 628 aaKnown RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF564Q8TBZ8 553 aaPredicted RBP13.75□□□□□ -0.21
UBE3A-228ENST00000638155 URGCPQ8TCY9 931 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF304Q9HCX3 659 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms