RNA–Protein interactions for RNA: ENST00000637985.1

CLN3-264, Transcript of CLN3, battenin, humanhuman

TSL 5

Gene CLN3, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-264ENST00000637985 DSPP15924 2871 aaKnown RBP18.12■□□□□ 0.49
CLN3-264ENST00000637985 NRG2O14511 850 aaPredicted RBP18.12■□□□□ 0.49
CLN3-264ENST00000637985 CPLX1O14810 134 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 AXIN1O15169 862 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 KIF4AO95239 1232 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 HOXA6P31267 233 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 OR1D2P34982 312 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 PTGDRQ13258 359 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 CCDC6Q16204 474 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 Q4G0T1 1027 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 FAM78AQ5JUQ0 283 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 HEATR6Q6AI08 1181 aaKnown RBP18.12■□□□□ 0.49
CLN3-264ENST00000637985 PDXDC1Q6P996 788 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 CEP68Q76N32 757 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 FAM177A1Q8N128 213 aaPredicted RBP18.12■□□□□ 0.49
CLN3-264ENST00000637985 TRIM6Q9C030 488 aaPredicted RBP18.12■□□□□ 0.49
CLN3-264ENST00000637985 PPME1Q9Y570 386 aa18.12■□□□□ 0.49
CLN3-264ENST00000637985 SETXQ7Z333 2677 aaKnown RBP18.12■□□□□ 0.49
CLN3-264ENST00000637985 TMEM8BA6NDV4 472 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 DEXIO95424 95 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 CCNE1P24864 410 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 RFC5P40937 340 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 MLLT6P55198 1093 aaPredicted RBP18.11■□□□□ 0.49
CLN3-264ENST00000637985 NLRP5P59047 1200 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 PTENP60484 403 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 NCBP1Q09161 790 aaKnown RBP18.11■□□□□ 0.49
CLN3-264ENST00000637985 TUSC3Q13454 348 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 PRSS36Q5K4E3 855 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 PSAPL1Q6NUJ1 521 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 CEP170P1Q96L14 293 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 C22orf23Q9BZE7 217 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 KLK14Q9P0G3 267 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 NBEAQ8NFP9 2946 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 DMXL2Q8TDJ6 3036 aa18.11■□□□□ 0.49
CLN3-264ENST00000637985 SRRM3A6NNA2 597 aaPredicted RBP18.1■□□□□ 0.49
CLN3-264ENST00000637985 EIF5BO60841 1220 aaKnown RBP18.1■□□□□ 0.49
CLN3-264ENST00000637985 PTPN2P17706 415 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 PSMC3P17980 439 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 ARF4P18085 180 aaPredicted RBP18.1■□□□□ 0.49
CLN3-264ENST00000637985 GDI1P31150 447 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 ANAPC15P60006 121 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 ELAVL2Q12926 359 aaKnown RBP18.1■□□□□ 0.49
CLN3-264ENST00000637985 AMHR2Q16671 573 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 PLA2G2CQ5R387 149 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 VITQ6UXI7 678 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 WDR5BQ86VZ2 330 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 IFNLR1Q8IU57 520 aaPredicted RBP18.1■□□□□ 0.49
CLN3-264ENST00000637985 TCP11Q8WWU5 503 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 ASB16Q96NS5 453 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 C2orf42Q9NWW7 574 aa18.1■□□□□ 0.49
CLN3-264ENST00000637985 CASTOR2A6NHX0 329 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 MICAL2O94851 1124 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 EPN2O95208 641 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 RAP1GAPP47736 663 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 QARSP47897 775 aaKnown RBP18.09■□□□□ 0.49
CLN3-264ENST00000637985 GALNT17Q6IS24 598 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 ETNPPLQ8TBG4 499 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 LARP6Q9BRS8 491 aaKnown RBP18.09■□□□□ 0.49
CLN3-264ENST00000637985 BMP2KQ9NSY1 1161 aaPredicted RBP18.09■□□□□ 0.49
CLN3-264ENST00000637985 RBM12Q9NTZ6 932 aaKnown RBP18.09■□□□□ 0.49
CLN3-264ENST00000637985 MTRRQ9UBK8 725 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 PCDHA4Q9UN74 947 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 AKAP13Q12802 2813 aa18.09■□□□□ 0.49
CLN3-264ENST00000637985 CYP3A7-CYP3A51PA0A087WV96 503 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 ARHGEF37A1IGU5 675 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 INO80B-WBP1J3KQ70 363 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 ARNTLO00327 626 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 EML1O00423 815 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 CDKL5O76039 1030 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 CYP3A7P24462 503 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 HOXC13P31276 330 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 MBTD1Q05BQ5 628 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 POU5F1BQ06416 359 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 RING1Q06587 406 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 SPIRE1Q08AE8 756 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 STK3Q13188 491 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 LRRC32Q14392 662 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 EMC2Q15006 297 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 WDR44Q5JSH3 913 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.08■□□□□ 0.48
CLN3-264ENST00000637985 Q6ZS52 159 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 DEPDC1BQ8WUY9 529 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 TCEAL4Q96EI5 215 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 ADAM33Q9BZ11 813 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 WRAP73Q9P2S5 460 aaPredicted RBP18.08■□□□□ 0.48
CLN3-264ENST00000637985 PARP2Q9UGN5 583 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 CDY1Q9Y6F8 540 aa18.08■□□□□ 0.48
CLN3-264ENST00000637985 A0A1B0GUA9 196 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 WDR27A2RRH5 827 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 NPTXRO95502 500 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 TDP2O95551 362 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 FGFR3P22607 806 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 NOVA1P51513 510 aaKnown RBP18.07■□□□□ 0.48
CLN3-264ENST00000637985 MXD4Q14582 209 aaPredicted RBP18.07■□□□□ 0.48
CLN3-264ENST00000637985 ANKRD1Q15327 319 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 SLC27A1Q6PCB7 646 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 C1orf228Q6PIY5 440 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 CACNA2D4Q7Z3S7 1137 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 BLIDQ8IZY5 108 aa18.07■□□□□ 0.48
CLN3-264ENST00000637985 DAGLBQ8NCG7 672 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms