RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ATP6V1C1P21283 382 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 CDH18Q13634 790 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 TUBB8Q3ZCM7 444 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 ALKBH5Q6P6C2 394 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 FAM167AQ96KS9 214 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 AK8Q96MA6 479 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 KIFC3Q9BVG8 833 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 GGA3Q9NZ52 723 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 CAB39Q9Y376 341 aaPredicted RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 KRT37O76014 449 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 GYS1P13807 737 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 YWHABP31946 246 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 NCAPHQ15003 741 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 WDR72Q3MJ13 1102 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 TMC4Q7Z404 712 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 DIS3LQ8TF46 1054 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 RWDD2AQ9UIY3 292 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 FBXO10Q9UK96 956 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 FAM32AQ9Y421 112 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 ARHGEF9O43307 516 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 TNNI3P19429 210 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 EIF3EP60228 445 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 NEK9Q8TD19 979 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 CELF1Q92879 486 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 EIF2AK1Q9BQI3 630 aaKnown RBP18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 NAGPAQ9UK23 515 aa18.78■□□□□ 0.6
CACNA1A-227ENST00000636549 ESYT3A0FGR9 886 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 MYL4P12829 197 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 GCFC2P16383 781 aaKnown RBP18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 MCAMP43121 646 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 EPHB4P54760 987 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 CYB5R4Q7L1T6 521 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 RNF26Q9BY78 433 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 PTPRHQ9HD43 1115 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 CYP4A22Q5TCH4 519 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 LLGL2Q6P1M3 1020 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 STKLD1Q8NE28 680 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 SPATA18Q8TC71 538 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 PCDHB8Q9UN66 801 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 GMFGO60234 142 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 SAMD7Q7Z3H4 446 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 SPATA16Q9BXB7 569 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 ARSEP51690 589 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 KDSRQ06136 332 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 DPYDQ12882 1025 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 FSCBQ5H9T9 825 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 HIBCHQ6NVY1 386 aaPredicted RBP18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 EXOC4Q96A65 974 aa18.77■□□□□ 0.6
CACNA1A-227ENST00000636549 CTIFO43310 598 aaKnown RBP18.77■□□□□ 0.59
CACNA1A-227ENST00000636549 ITGB6P18564 788 aa18.77■□□□□ 0.59
CACNA1A-227ENST00000636549 SPARCL1Q14515 664 aa18.77■□□□□ 0.59
CACNA1A-227ENST00000636549 CCDC81Q6ZN84 652 aa18.77■□□□□ 0.59
CACNA1A-227ENST00000636549 SLC30A1Q9Y6M5 507 aa18.77■□□□□ 0.59
CACNA1A-227ENST00000636549 HORMAD1Q86X24 394 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 AHCYL2Q96HN2 611 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 MID2Q9UJV3 735 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 EMSYQ7Z589 1322 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 UBE2Q2LH0YL09 131 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 PQBP1O60828 265 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 PYGBP11216 843 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 PGS1Q32NB8 556 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 TRIM33Q9UPN9 1127 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 IPO5O00410 1097 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 CHI3L1P36222 383 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 TRIM69Q86WT6 500 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 CPB2Q96IY4 423 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 UNKQ9C0B0 810 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 EXOSC4Q9NPD3 245 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 TDRKHQ9Y2W6 561 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 RASSF9O75901 435 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 MBL2P11226 248 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 NMT1P30419 496 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 GPC5P78333 572 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 SCARA3Q6AZY7 606 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 RGL4Q8IZJ4 473 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 CLEC4FQ8N1N0 589 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 ARHGEF38Q9NXL2 777 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 NFICP08651 508 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 MLH1P40692 756 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 DCAF6Q58WW2 860 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 XXYLT1Q8NBI6 393 aa18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 LSG1Q9H089 658 aaKnown RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 DRAP1Q14919 205 aaPredicted RBP18.76■□□□□ 0.59
CACNA1A-227ENST00000636549 EEF2KO00418 725 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 TDP2O95551 362 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 MAP3K7CLP57077 242 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 GRIN1Q05586 938 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 PAPOLBQ9NRJ5 636 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 GGPS1O95749 300 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 ENO3P13929 434 aaPredicted RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 HARS2P49590 506 aaKnown RBP18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 STAT5BP51692 787 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 E2F4Q16254 413 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 CEP78Q5JTW2 689 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 DOK6Q6PKX4 331 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 HAUS6Q7Z4H7 955 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 GPD1LQ8N335 351 aa18.75■□□□□ 0.59
CACNA1A-227ENST00000636549 NSUN7Q8NE18 718 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms