RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 MOGSQ13724 837 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 AP1ARQ63HQ0 302 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 ACAD10Q6JQN1 1059 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 ZNF365Q70YC5 407 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 EGFL6Q8IUX8 553 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 LARGE2Q8N3Y3 721 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 SHC3Q92529 594 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 ARHGEF1Q92888 912 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 YIPF3Q9GZM5 350 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 GSTTP1A0A1W2PQM5 241 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 FOXO6A8MYZ6 492 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 C6orf229H3BNL8 230 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 CYP26A1O43174 497 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 CETPP11597 493 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 ACADSP16219 412 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 MAPK4P31152 587 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 SGSM1Q2NKQ1 1148 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 TRIM68Q6AZZ1 485 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 TDRPQ86YL5 185 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 ASAP3Q8TDY4 903 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 SLC5A5Q92911 643 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 PAIP2Q9BPZ3 127 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 TBC1D10AQ9BXI6 508 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 WDR11Q9BZH6 1224 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 LRRC4BQ9NT99 713 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 DNAJC17Q9NVM6 304 aaKnown RBP15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 HAO1Q9UJM8 370 aa15.76■□□□□ 0.11
CACNA1A-220ENST00000635988 ARHGEF35A5YM69 484 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 CHMP2AO43633 222 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 TARSP26639 723 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 SNRPFP62306 86 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 RBBP5Q15291 538 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 PDK4Q16654 411 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 ANO7Q6IWH7 933 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 TRABD2AQ86V40 505 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 SLC47A2Q86VL8 602 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 CPNE8Q86YQ8 564 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 XXYLT1Q8NBI6 393 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 DENND1AQ8TEH3 1009 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 TTC25Q96NG3 672 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 ACCSQ96QU6 501 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 PPCSQ9HAB8 311 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 LARSQ9P2J5 1176 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 K7ENM7 598 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 GAS7O60861 476 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 EDF1O60869 148 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 BBOX1O75936 387 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 CYP11B1P15538 503 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 CTCFP49711 727 aaPredicted RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 TMED2Q15363 201 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 CCNG2Q16589 344 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 GRIPAP1Q4V328 841 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 TMEM63BQ5T3F8 832 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 LONP2Q86WA8 852 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 PPM1KQ8N3J5 372 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 CERKQ8TCT0 537 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 LRRC8CQ8TDW0 803 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 ATG4AQ8WYN0 398 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 RBM17Q96I25 401 aaKnown RBP15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 GMCL1Q96IK5 515 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 DCLRE1BQ9H816 532 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 NEU2Q9Y3R4 380 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 ZNF536O15090 1300 aa15.75■□□□□ 0.11
CACNA1A-220ENST00000635988 NPTXRO95502 500 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 HOXA13P31271 388 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 MAGEA4P43358 317 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 KLC1Q07866 573 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 PTP4A2Q12974 167 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 IKQ13123 557 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 DNAJC3Q13217 504 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 TRIP13Q15645 432 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 SEPT14Q6ZU15 432 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 GMCL1P1Q8NEA9 526 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 SLC7A6OSQ96CW6 309 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 SAR1AQ9NR31 198 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 EXOC1LA0A1B0GW35 172 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 ENO4A6NNW6 628 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 ZBTB39O15060 712 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 RXRBP28702 533 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 PTPN4P29074 926 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 SLC45A4Q5BKX6 768 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 IZUMO3Q5VZ72 239 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 NSMFQ6X4W1 530 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 ZCCHC9Q8N567 271 aaKnown RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 ZNF398Q8TD17 642 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 KAT5Q92993 513 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 KREMEN1Q96MU8 473 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 SMC6Q96SB8 1091 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 PCIF1Q9H4Z3 704 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 TLE6Q9H808 572 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 AVENQ9NQS1 362 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 POLLQ9UGP5 575 aa15.74■□□□□ 0.11
CACNA1A-220ENST00000635988 F5H6K3 240 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 RNASELQ05823 741 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 ADCY1Q08828 1119 aa15.73■□□□□ 0.11
CACNA1A-220ENST00000635988 TNIP1Q15025 636 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms