RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 NYXQ9GZU5 481 aa6.79□□□□□ -1.32
LINC00254-202ENST00000633813 TFCP2L1Q9NZI6 479 aa6.79□□□□□ -1.32
LINC00254-202ENST00000633813 H2AFY2Q9P0M6 372 aaPredicted RBP6.79□□□□□ -1.32
LINC00254-202ENST00000633813 SRP68Q9UHB9 627 aaKnown RBP6.79□□□□□ -1.32
LINC00254-202ENST00000633813 C4BP0C0L5 1744 aa6.79□□□□□ -1.32
LINC00254-202ENST00000633813 NTSR2O95665 410 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 ZNF888P0CJ79 500 aaPredicted RBP6.78□□□□□ -1.32
LINC00254-202ENST00000633813 GYS1P13807 737 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 LSSP48449 732 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 EPHB4P54760 987 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 RRADP55042 308 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 LRRC32Q14392 662 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 EZH2Q15910 746 aaKnown RBP6.78□□□□□ -1.32
LINC00254-202ENST00000633813 CCDC57Q2TAC2 916 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 DDX46Q7L014 1031 aaKnown RBP6.78□□□□□ -1.32
LINC00254-202ENST00000633813 THNSL2Q86YJ6 484 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 SYNE4Q8N205 404 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 USP7Q93009 1102 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 USP36Q9P275 1121 aaKnown RBP6.78□□□□□ -1.32
LINC00254-202ENST00000633813 CDC42EP3Q9UKI2 254 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 PA2G4Q9UQ80 394 aaKnown RBP6.78□□□□□ -1.32
LINC00254-202ENST00000633813 PRKAB1Q9Y478 270 aa6.78□□□□□ -1.32
LINC00254-202ENST00000633813 NPEPPSL1A6NEC2 478 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 K7ESM1 405 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 FKBP9O95302 570 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 ITGB3P05106 788 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 TM4SF1P30408 202 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 BCAR1P56945 870 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 IFIT5Q13325 482 aaKnown RBP6.77□□□□□ -1.33
LINC00254-202ENST00000633813 OS9Q13438 667 aaPredicted RBP6.77□□□□□ -1.33
LINC00254-202ENST00000633813 DHCR24Q15392 516 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 ZNF827Q17R98 1081 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 GPR158Q5T848 1215 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 SLFN13Q68D06 897 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 ESRP1Q6NXG1 681 aaKnown RBP6.77□□□□□ -1.33
LINC00254-202ENST00000633813 FKBP9P1Q75LS8 142 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 NBPF5PQ86XG9 351 aaPredicted RBP6.77□□□□□ -1.33
LINC00254-202ENST00000633813 C16orf71Q8IYS4 520 aaPredicted RBP6.77□□□□□ -1.33
LINC00254-202ENST00000633813 CLASRPQ8N2M8 674 aaKnown RBP6.77□□□□□ -1.33
LINC00254-202ENST00000633813 CHAC2Q8WUX2 184 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 SEC61A2Q9H9S3 476 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 TAF1LQ8IZX4 1826 aa6.77□□□□□ -1.33
LINC00254-202ENST00000633813 NUP98P52948 1817 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 ANKRD18BA2A2Z9 1011 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 EYA2O00167 538 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 CIAO1O76071 339 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 LSP1P33241 339 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 STAT3P40763 770 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 IL15P40933 162 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 ADCYAP1R1P41586 468 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SESN2P58004 480 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 PHC1P78364 1004 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SF3B3Q15393 1217 aaKnown RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SLC15A2Q16348 729 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 DGKDQ16760 1214 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 CCDC152Q4G0S7 254 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 CT47A1Q5JQC4 288 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 RNF180Q86T96 592 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 COL23A1Q86Y22 540 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 KLHDC4Q8TBB5 520 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SIL1Q9H173 461 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SPTLC3Q9NUV7 552 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 STK32BQ9NY57 414 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 KCMF1Q9P0J7 381 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SAE1Q9UBE0 346 aaPredicted RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 STAP2Q9UGK3 403 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 VWA7Q9Y334 891 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 CARMIL3Q8ND23 1372 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 AFDNP55196 1824 aaKnown RBP6.76□□□□□ -1.33
LINC00254-202ENST00000633813 SALL3Q9BXA9 1300 aa6.76□□□□□ -1.33
LINC00254-202ENST00000633813 RTL9Q8NET4 1388 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 B8ZZF3 427 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 ZEB2O60315 1214 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 APOL3O95236 402 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 CPEP16870 476 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 MASP1P48740 699 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 PDE1AP54750 535 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 RAC3P60763 192 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 SMAD3P84022 425 aaKnown RBP6.75□□□□□ -1.33
LINC00254-202ENST00000633813 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 BMP2KLQ5H9B9 411 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 EGFLAMQ63HQ2 1017 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 TRIM68Q6AZZ1 485 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 LDHAL6AQ6ZMR3 332 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 USP30Q70CQ3 517 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 ATG9AQ7Z3C6 839 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 CIR1Q86X95 450 aaPredicted RBP6.75□□□□□ -1.33
LINC00254-202ENST00000633813 TTC1Q99614 292 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 OR10A2Q9H208 303 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 GREM2Q9H772 168 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 IFT22Q9H7X7 185 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 IL1RAPL2Q9NP60 686 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 GPR108Q9NPR9 543 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 FAM184BQ9ULE4 1060 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 SYNPO2Q9UMS6 1093 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 PTPN22Q9Y2R2 807 aa6.75□□□□□ -1.33
LINC00254-202ENST00000633813 NR2E1Q9Y466 385 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms