RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SLMAPQ14BN4 828 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 TBC1D10BQ4KMP7 808 aaPredicted RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 DCAF15Q66K64 600 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 AADACL2Q6P093 401 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 SLC39A4Q6P5W5 647 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 CYFIP1Q7L576 1253 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 ARMC9Q7Z3E5 817 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 ZNF677Q86XU0 584 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 CCDC105Q8IYK2 499 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 FBXO25Q8TCJ0 367 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 TAS1R2Q8TE23 839 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 NSUN6Q8TEA1 469 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 JDP2Q8WYK2 163 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 BSNDQ8WZ55 320 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 DDX1Q92499 740 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 DHX38Q92620 1227 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 ATG4CQ96DT6 458 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 BICD1Q96G01 975 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 PGM2Q96G03 612 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 KIFC3Q9BVG8 833 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 MAF1Q9H063 256 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 STMN4Q9H169 189 aaPredicted RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 ATP6V0A4Q9HBG4 840 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 AS3MTQ9HBK9 375 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 AVENQ9NQS1 362 aaPredicted RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 TOPORSQ9NS56 1045 aaPredicted RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 TMEM51Q9NW97 253 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 GRHL1Q9NZI5 618 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 PIM2Q9P1W9 311 aa8.64□□□□□ -1.03
GPC3-204ENST00000631057 CNOT8Q9UFF9 292 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 CNOT7Q9UIV1 285 aaKnown RBP8.64□□□□□ -1.03
GPC3-204ENST00000631057 FAM170AA1A519 330 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 EXTL3O43909 919 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 ZNF862O60290 1169 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 STBD1O95210 358 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 ECEL1O95672 775 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 DLATP10515 647 aaKnown RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 PYGMP11217 842 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 KCNA2P16389 499 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 OSBPP22059 807 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 MAPK4P31152 587 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 LIG3P49916 1009 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 SEC24CP53992 1094 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 PRKCEQ02156 737 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 ADCY2Q08462 1091 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 DRP2Q13474 957 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 SIX1Q15475 284 aaPredicted RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 WDR44Q5JSH3 913 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 SNRNP48Q6IEG0 339 aaKnown RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 MIS18BP1Q6P0N0 1132 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 TTC27Q6P3X3 843 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 SYDE1Q6ZW31 735 aaPredicted RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 TRMT1LQ7Z2T5 733 aaKnown RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 MICALL1Q8N3F8 863 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 PSPC1Q8WXF1 523 aaKnown RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 SLCO2A1Q92959 643 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 CENPTQ96BT3 561 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 CYFIP2Q96F07 1278 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 POP1Q99575 1024 aaKnown RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 TMEM109Q9BVC6 243 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 EPB41L4BQ9H329 900 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 LRRC19Q9H756 370 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 PPANQ9NQ55 473 aaKnown RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.63□□□□□ -1.03
GPC3-204ENST00000631057 PDLIM7Q9NR12 457 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 ARHGAP28Q9P2N2 729 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 SLC9A2Q9UBY0 812 aa8.63□□□□□ -1.03
GPC3-204ENST00000631057 SEPT9Q9UHD8 586 aaPredicted RBP8.63□□□□□ -1.03
GPC3-204ENST00000631057 FSCN2O14926 492 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 RGS16O15492 202 aaPredicted RBP8.62□□□□□ -1.03
GPC3-204ENST00000631057 GRIN3BO60391 1043 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 CAND2O75155 1236 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 AGTP01019 485 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 RARAP10276 462 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 SLC1A1P43005 524 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 LIG4P49917 911 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 BACE1P56817 501 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 STRN3Q13033 797 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 CALCOCO2Q13137 446 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 DGKZQ13574 1117 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 PSMD6Q15008 389 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 GNPTABQ3T906 1256 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 SGO2Q562F6 1265 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 XKR3Q5GH77 459 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 SWSAP1Q6NVH7 229 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 PPP1R2P3Q6NXS1 205 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 TRIM72Q6ZMU5 477 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 C15orf39Q6ZRI6 1047 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 SCYL3Q8IZE3 742 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 ZDHHC14Q8IZN3 488 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 REPS2Q8NFH8 660 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 RAPGEF5Q92565 580 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 KCNN1Q92952 543 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 ART4Q93070 314 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 TATDN2Q93075 761 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 BTBD6Q96KE9 485 aa8.62□□□□□ -1.03
GPC3-204ENST00000631057 FNBP1Q96RU3 617 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms