RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 INSRRP14616 1297 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MARK3P27448 753 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TMOD1P28289 359 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 USP8P40818 1118 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MATR3P43243 847 aaKnown RBP eCLIP5.97□□□□□ -1.45
NEK3-211ENST00000629912 PDE6CP51160 858 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 WNT7BP56706 349 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TNNC1P63316 161 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 CDC42EP1Q00587 391 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TNFAIP2Q03169 654 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MBTD1Q05BQ5 628 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 C2orf54Q08AI8 447 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 NNTQ13423 1086 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 CUL2Q13617 745 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 ACVR2BQ13705 512 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 PPP2R5EQ16537 467 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 FAM110CQ1W6H9 321 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 SGSM1Q2NKQ1 1148 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 DUSP28Q4G0W2 176 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 ZBTB41Q5SVQ8 909 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MPZL3Q6UWV2 235 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TRIM72Q6ZMU5 477 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 GPR142Q7Z601 462 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 DPP9Q86TI2 863 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TRIM50Q86XT4 487 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 DNAAF5Q86Y56 855 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 RHPN2Q8IUC4 686 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 IFT20Q8IY31 132 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 LRRC71Q8N4P6 559 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 UBR7Q8N806 425 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 OR5B17Q8NGF7 314 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 AFG1LQ8WV93 481 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MAML3Q96JK9 1138 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 NAP1L3Q99457 506 aaPredicted RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 TINF2Q9BSI4 451 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 C16orf70Q9BSU1 422 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TCHPQ9BT92 498 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 PI4K2AQ9BTU6 479 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 WNT8AQ9H1J5 351 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 CARD9Q9H257 536 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 RRAGCQ9HB90 399 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 OSGEPQ9NPF4 335 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 GDF3Q9NR23 364 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 RBM12Q9NTZ6 932 aaKnown RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 SEPT11Q9NVA2 429 aaKnown RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 PRMT7Q9NVM4 692 aaPredicted RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 SLC5A4Q9NY91 659 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 STIM2Q9P246 746 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 DMGDHQ9UI17 866 aaKnown RBP5.97□□□□□ -1.45
NEK3-211ENST00000629912 GTF3C4Q9UKN8 822 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 COG5Q9UP83 839 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 TRPC6Q9Y210 931 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 ALG6Q9Y672 507 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 ZSWIM8A7E2V4 1837 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 ZNF236Q9UL36 1845 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 PTPRJQ12913 1337 aa5.97□□□□□ -1.45
NEK3-211ENST00000629912 MGAMO43451 1857 aa5.96□□□□□ -1.45
NEK3-211ENST00000629912 TRPM7Q96QT4 1865 aa5.96□□□□□ -1.45
NEK3-211ENST00000629912 DOCK3Q8IZD9 2030 aa5.96□□□□□ -1.45
NEK3-211ENST00000629912 RRN3P2A6NIE6 340 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 TTLL13PA6NNM8 815 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 H3BRB1 525 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PGRMC1O00264 195 aaKnown RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 TULP1O00294 542 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 PHACTR2O75167 634 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 IL18RAPO95256 599 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 CELF2O95319 508 aaKnown RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 ITGBL1O95965 494 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 CST3P01034 146 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 MCF2P10911 925 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 KRT5P13647 590 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 HSPA6P17066 643 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 SMPD1P17405 629 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 ABCB4P21439 1286 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 CTNNA2P26232 953 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 ADCYAP1R1P41586 468 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PIK3CAP42336 1068 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PHKA2P46019 1235 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PEX5P50542 639 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 ZNF132P52740 706 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 INHBEP58166 350 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 GABPB1Q06547 395 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 GPS2Q13227 327 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 BIRC3Q13489 604 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 NCOA4Q13772 614 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 SMC1AQ14683 1233 aaKnown RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 CASP8Q14790 479 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 AMHR2Q16671 573 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 MORN1Q5T089 497 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 ATF7IP2Q5U623 682 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 TAF3Q5VWG9 929 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 CST9Q5W186 159 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 EMBQ6PCB8 327 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 MTHFD1LQ6UB35 978 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 PHF13Q86YI8 300 aaPredicted RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 MCOLN2Q8IZK6 566 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 UBL4BQ8N7F7 174 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 AENQ8WTP8 325 aaKnown RBP5.96□□□□□ -1.46
NEK3-211ENST00000629912 HDAC7Q8WUI4 952 aa5.96□□□□□ -1.46
NEK3-211ENST00000629912 TRAPPC12Q8WVT3 735 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms