RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 PRRG3Q9BZD7 231 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 FEM1BQ9UK73 627 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 TSC22D4Q9Y3Q8 395 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 JAK1P23458 1154 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 BCAR1P56945 870 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 PGM1P36871 562 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 PRELPP51888 382 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ATP6V1G3Q96LB4 118 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CSPG5O95196 566 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 MYL2P10916 166 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 MLNP12872 115 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 HSPA9P38646 679 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 TEX2Q8IWB9 1127 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 SNX31Q8N9S9 440 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARID1BQ8NFD5 2236 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 SH2B2O14492 632 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 TYK2P29597 1187 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 EME1Q96AY2 570 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 DNAJC7Q99615 494 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARHGEF3Q9NR81 526 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 TBC1D22BQ9NU19 505 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 SYNDIG1LA6NDD5 238 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CLK1P49759 484 aaKnown RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CDC42EP1Q00587 391 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 SNX17Q15036 470 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CHMP1BQ7LBR1 199 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 SETD3Q86TU7 594 aaPredicted RBP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 PAGE5Q96GU1 130 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CYP4F11Q9HBI6 524 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 ETNK1Q9HBU6 452 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 AP4S1Q9Y587 144 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CDY2AQ9Y6F7 541 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 CDY1Q9Y6F8 540 aa13.86□□□□□ -0.19
SYNGAP1-208ENST00000629380 HIST1H2AGP0C0S8 130 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 HIST1H2ADP20671 130 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 NCF4Q15080 339 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 DIS3LQ8TF46 1054 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 SLC16A10Q8TF71 515 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 HIST1H2AHQ96KK5 128 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 HIST1H2AJQ99878 128 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 H2AFJQ9BTM1 129 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 LSM7Q9UK45 103 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ALDH1A2O94788 518 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZBTB7AO95365 584 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 IYDQ6PHW0 289 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 RHOT1Q8IXI2 618 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 NUP93Q8N1F7 819 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 CCDC134Q9H6E4 229 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 CNOT8Q9UFF9 292 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 H7C0S8 307 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 EEF2KMTQ96G04 330 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 TAF1DQ9H5J8 278 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 MBD2Q9UBB5 411 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 PHKA1P46020 1223 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 TPI1P60174 286 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARHGAP17Q68EM7 881 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 PPM1NQ8N819 430 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 HDAC6Q9UBN7 1215 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 GUCA1AP43080 201 aaPredicted RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 PPP3CCP48454 512 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ICE1Q9Y2F5 2266 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 SPAG6O75602 509 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 GNA15P30679 374 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 AKT1P31749 480 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 RGS4P49798 205 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 SNAP25P60880 206 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ANKRD40Q6AI12 368 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ANKRD49Q8WVL7 239 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ABHD10Q9NUJ1 306 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 IMPAD1Q9NX62 359 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 SCN3BQ9NY72 215 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 PDAP1Q13442 181 aaKnown RBP13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 ARMC6Q6NXE6 501 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 CCDC103Q8IW40 242 aa13.85□□□□□ -0.19
SYNGAP1-208ENST00000629380 SUPT3HB4E1H0 165 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 TEX28O15482 410 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 KCNQ3O43525 872 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 C6orf10Q5SRN2 563 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 TRIM65Q6PJ69 517 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 FAM47EQ6ZV65 393 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 SYNE4Q8N205 404 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 FAM187AA6NFU0 413 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 GGCXP38435 758 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 PSMC6P62333 389 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 USP17L2Q6R6M4 530 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 DDX53Q86TM3 631 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 CLEC4FQ8N1N0 589 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 UTP6Q9NYH9 597 aaKnown RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 CDHR2Q9BYE9 1310 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZNF544Q6NX49 715 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 RNF135Q8IUD6 432 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 PASD1Q8IV76 773 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 ZHX2Q9Y6X8 837 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 SLC1A1P43005 524 aa13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 CYLC2Q14093 348 aaPredicted RBP13.84□□□□□ -0.19
SYNGAP1-208ENST00000629380 DMAP1Q9NPF5 467 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms