RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 TTYH1Q9H313 450 aaPredicted RBP20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 DMAC2Q9NW81 257 aa20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 SPG21Q9NZD8 308 aa20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 DNAJB4Q9UDY4 337 aa20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 FRMD4BQ9Y2L6 1034 aa20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 FAN1Q9Y2M0 1017 aa20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 DERAQ9Y315 318 aa20.75■□□□□ 0.91
SQSTM1-216ENST00000626660 BICDL2A1A5D9 508 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 PPP1R3GB7ZBB8 358 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 C5orf67F2Z3F1 127 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 MEFVO15553 781 aaPredicted RBP20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 CD44P16070 742 aaKnown RBP20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 SLC11A1P49279 550 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 NLRP12P59046 1061 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 TMEM132DQ14C87 1099 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 ZCWPW2Q504Y3 356 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 NELFBQ8WX92 580 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 UROC1Q96N76 676 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 ZMAT2Q96NC0 199 aaKnown RBP20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 TMEM63CQ9P1W3 806 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 DACH1Q9UI36 760 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 UBQLN1Q9UMX0 589 aaKnown RBP20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 CTNND2Q9UQB3 1225 aa20.74■□□□□ 0.91
SQSTM1-216ENST00000626660 B4GALT3O60512 393 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 GALTP07902 379 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 PBX3P40426 434 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 SPAG1Q07617 926 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 PAK1Q13153 545 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 ADAM9Q13443 819 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 GPM6BQ13491 265 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 NAB2Q15742 525 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 CEP135Q66GS9 1140 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 JADE1Q6IE81 842 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 SASS6Q6UVJ0 657 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 NT5DC4Q86YG4 428 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 BEST2Q8NFU1 509 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 TMEM169Q96HH4 297 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 COLEC11Q9BWP8 271 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 C2CD2Q9Y426 696 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 A0A0C4DFX4 3053 aa20.73■□□□□ 0.91
SQSTM1-216ENST00000626660 CASTOR2A6NHX0 329 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 NT5C1B-RDH14C9J2C7 533 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 NRP1O14786 923 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 CETN3O15182 167 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 FGF18O76093 207 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 KRT17Q04695 432 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 CYP24A1Q07973 514 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 ANKRD40Q6AI12 368 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 SLC39A11Q8N1S5 342 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 KLHL23Q8NBE8 558 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 DDX27Q96GQ7 796 aaKnown RBP20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 FAM161BQ96MY7 647 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 PDE11AQ9HCR9 933 aa20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 PRG3Q9Y2Y8 225 aaPredicted RBP20.72■□□□□ 0.91
SQSTM1-216ENST00000626660 TRIM49BA6NDI0 452 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 H3BNC9 293 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 NFICP08651 508 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 CYP3A5P20815 502 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 FKBP3Q00688 224 aaKnown RBP20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 FOXR2Q6PJQ5 311 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 GDPD5Q8WTR4 605 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 CACTINQ8WUQ7 758 aaKnown RBP20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 C18orf25Q96B23 403 aaPredicted RBP20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 FNBP1Q96RU3 617 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
SQSTM1-216ENST00000626660 MAPK13O15264 365 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 LETM1O95202 739 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 ITGB1P05556 798 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 RPL9P32969 192 aaKnown RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 PSMC2P35998 433 aaKnown RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 CASP4P49662 377 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 PMS1P54277 932 aaKnown RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 TFAMQ00059 246 aaKnown RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 SOX4Q06945 474 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 GRIN2CQ14957 1233 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 PSMD6Q15008 389 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 NFKBIBQ15653 356 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 ZBTB6Q15916 424 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 DPCR1Q3MIW9 517 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 USP37Q86T82 979 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 FAM186BQ8IYM0 893 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 IGSF21Q96ID5 467 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 MFSD14AQ96MC6 490 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 GOLGA2P5Q9HBQ8 144 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 TUBGCP4Q9UGJ1 667 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 RWDD2AQ9UIY3 292 aa20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 COL4A4P53420 1690 aaPredicted RBP20.7■□□□□ 0.9
SQSTM1-216ENST00000626660 PLXNA4Q9HCM2 1894 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 EPOPA6NHQ4 379 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 TMEM191BP0C7N4 346 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 EPB41P11171 864 aaKnown RBP20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 KRT13P13646 458 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 STX17P56962 302 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 PLCB3Q01970 1234 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 UBE3AQ05086 875 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 SPATA1Q5VX52 437 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 TTI2Q6NXR4 508 aa20.69■□□□□ 0.9
SQSTM1-216ENST00000626660 DCLRE1AQ6PJP8 1040 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms