RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 NXF3Q9H4D5 531 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-211ENST00000625980 AGO3Q9H9G7 860 aaKnown RBP13.92□□□□□ -0.18
SPTAN1-211ENST00000625980 NHEJ1Q9H9Q4 299 aaPredicted RBP13.92□□□□□ -0.18
SPTAN1-211ENST00000625980 AIPL1Q9NZN9 384 aa13.92□□□□□ -0.18
SPTAN1-211ENST00000625980 ST3GAL5Q9UNP4 418 aa13.92□□□□□ -0.18
SPTAN1-211ENST00000625980 F8VZ95 297 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 PHACTR2O75167 634 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 CST3P01034 146 aaPredicted RBP13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 EIF4A3P38919 411 aaKnown RBP13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 CDK17Q00537 523 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 NFX1Q12986 1120 aaKnown RBP13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 ASIC2Q16515 512 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 KYAT1Q16773 422 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 DUOXA2Q1HG44 320 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 ZNF618Q5T7W0 954 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 SPOPLQ6IQ16 392 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 TRAPPC11Q7Z392 1133 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 IRF2BP2Q7Z5L9 587 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 ACRBPQ8NEB7 543 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 HELQQ8TDG4 1101 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 KREMEN1Q96MU8 473 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 NT5C1BQ96P26 610 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 SPTLC3Q9NUV7 552 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 MYO6Q9UM54 1294 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 ADGRG1Q9Y653 693 aa13.91□□□□□ -0.18
SPTAN1-211ENST00000625980 A0A0U1RQJ8 604 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 FOXN3O00409 490 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 GFPT2O94808 682 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 RPLP2P05387 115 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 GHRP10912 638 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 CDK7P50613 346 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 AP3M2P53677 418 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 FAM26DQ5JW98 314 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 FBXO47Q5MNV8 452 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 REXO1L1PQ8IX06 675 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 PPM1KQ8N3J5 372 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 ATRIPQ8WXE1 791 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 ZNF333Q96JL9 665 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 CCDC94Q9BW85 323 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 APOL6Q9BWW8 343 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 APOBEC3GQ9HC16 384 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 KCND1Q9NSA2 647 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 PPP2R2CQ9Y2T4 447 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 EPN1Q9Y6I3 576 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 NDUFA10O95299 355 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 SERPING1P05155 500 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 CKBP12277 381 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 AKAP5P24588 427 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 CD52P31358 61 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 SOX5P35711 763 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 STAT1P42224 750 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 MNX1P50219 401 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 POU5F1Q01860 360 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 NCOA4Q13772 614 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 LPIN1Q14693 890 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 TDRD12Q587J7 1177 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 FBXO46Q6PJ61 603 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 TRAF7Q6Q0C0 670 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 APBB1IPQ7Z5R6 666 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 ANKRD36BP1Q96IX9 119 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 PPP1R13BQ96KQ4 1090 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 ASB7Q9H672 318 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 RNF19AQ9NV58 838 aa13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 REXO2Q9Y3B8 237 aaKnown RBP13.9□□□□□ -0.18
SPTAN1-211ENST00000625980 UMODL1Q5DID0 1318 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 TNNC2P02585 160 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 RFX1P22670 979 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 MYL6P60660 151 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 KLHL30Q0D2K2 578 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 WDR44Q5JSH3 913 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 TWF2Q6IBS0 349 aaKnown RBP13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 SNX27Q96L92 541 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 CCDC42Q96M95 316 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 HAUS4Q9H6D7 363 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 ERVK-5Q9HDB9 667 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 SIX4Q9UIU6 781 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 PADI3Q9ULW8 664 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 DAAM1Q9Y4D1 1078 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 IPPQ9Y573 584 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 ANK1P16157 1881 aa13.89□□□□□ -0.19
SPTAN1-211ENST00000625980 ZNF263O14978 683 aa13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 EVI5O60447 810 aa13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 ZC3H11AO75152 810 aaKnown RBP eCLIP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 RECQL4O94761 1208 aa13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 TFRCP02786 760 aaKnown RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 HSPA1AP0DMV8 641 aaKnown RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 CYLC1P35663 651 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 MFAP3P55082 362 aa13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 TMEM132DQ14C87 1099 aa13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 ASTE1Q2TB18 679 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 CCDC170Q8IYT3 715 aa13.88□□□□□ -0.19
SPTAN1-211ENST00000625980 C1orf127Q8N9H9 656 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms