RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 CFAP69A5D8W1 941 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 TBX3O15119 743 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 KPNA5O15131 536 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 PHGDHO43175 533 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 FRS3O43559 492 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 RPLP2P05387 115 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 IFIT2P09913 472 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 KITP10721 976 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 IL2RBP14784 551 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 CR2P20023 1033 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 CNR2P34972 360 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 PRIM2P49643 509 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 CACNB3P54284 484 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 NPEPPSP55786 919 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 EXOSC9Q06265 439 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 FGL2Q14314 439 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 POLD3Q15054 466 aaPredicted RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 BRD3Q15059 726 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 OTUD7BQ6GQQ9 843 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 BORAQ6PGQ7 559 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 UBE3BQ7Z3V4 1068 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 SP8Q8IXZ3 490 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 LGI4Q8N135 537 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 SAMD3Q8N6K7 520 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 RNF169Q8NCN4 708 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 MAML1Q92585 1016 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 KCNC2Q96PR1 638 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 LMF1Q96S06 567 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 P2RX7Q99572 595 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 TCF25Q9BQ70 676 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 NDC1Q9BTX1 674 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 MRI1Q9BV20 369 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 MRPL46Q9H2W6 279 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 C12orf65Q9H3J6 166 aaKnown RBP3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 KLHL11Q9NVR0 708 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 PNPOQ9NVS9 261 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 PPP4R1LQ9P1A2 415 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 CPA4Q9UI42 421 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 CORO2BQ9UQ03 480 aa3.47□□□□□ -1.85
SCARNA4-202ENST00000625402 B5MCH6 92 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 F8W8V4 182 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 HOXA3O43365 443 aaPredicted RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 TPD52L2O43399 206 aaKnown RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 LAMTOR5O43504 91 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 LDHAP00338 332 aaKnown RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 MYF5P13349 255 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 HDCP19113 662 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 SLC6A2P23975 617 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PIK3CBP42338 1070 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PHKA1P46020 1223 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 HTR3AP46098 478 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PIK3CGP48736 1102 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 CASP5P51878 434 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 ARFIP2P53365 341 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 SOX8P57073 446 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 RAP2BP61225 183 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PPP2CBP62714 309 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PPP2CAP67775 309 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 GPSM2P81274 684 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 BIRC2Q13490 618 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 HDAC1Q13547 482 aaPredicted RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PABPC1LQ4VXU2 614 aaKnown RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 CCDC93Q567U6 631 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 C1QL3Q5VWW1 255 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 ZNF529Q6P280 563 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 ARHGEF18Q6ZSZ5 1173 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PDZD4Q76G19 769 aaPredicted RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 GPRIN1Q7Z2K8 1008 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PLEKHH3Q7Z736 793 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 FAM124AQ86V42 546 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 MORC1Q86VD1 984 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 GJA10Q969M2 543 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 MTFMTQ96DP5 389 aaKnown RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 FAM167AQ96KS9 214 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 ZNF512Q96ME7 567 aaPredicted RBP3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 OR14A2Q96R54 314 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 TBCBQ99426 244 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 PCGF6Q9BYE7 350 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 TRIM54Q9BYV2 358 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 WDCPQ9H6R7 721 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 SEC61A2Q9H9S3 476 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 USP40Q9NVE5 1235 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 MOCS1Q9NZB8 636 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 SLC45A2Q9UMX9 530 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 SH3BP1Q9Y3L3 701 aa3.46□□□□□ -1.86
SCARNA4-202ENST00000625402 A0A1W2PPL8 197 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 CDHR4A6H8M9 788 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 RASA4BC9J798 803 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 KIAA0391O15091 583 aaKnown RBP3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 GPR42O15529 346 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 RASA4O43374 803 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 FOXS1O43638 330 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 PRSS23O95084 383 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 ARIH2O95376 493 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 FTH1P19P0C7X4 201 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 TSHRP16473 764 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 ATP5JP18859 108 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 SMARCA1P28370 1054 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 SLC7A1P30825 629 aa3.45□□□□□ -1.86
SCARNA4-202ENST00000625402 PTTG1IPP53801 180 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms