RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 RPS19P39019 145 aaKnown RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 SELENOPP49908 381 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 MEOX1P50221 254 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 SART3Q15020 963 aaKnown RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 GLB1LQ6UWU2 654 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 GAREM2Q75VX8 874 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 TAX1BP1Q86VP1 789 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 SPATS2Q86XZ4 545 aaKnown RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 RTKN2Q8IZC4 609 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 CBARPQ8N350 705 aaPredicted RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 LILRA3Q8N6C8 439 aaPredicted RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 DVL3Q92997 716 aaPredicted RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 BORCS6Q96GS4 357 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 ACAP3Q96P50 834 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 MENTQ9BUN1 341 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 SPC25Q9HBM1 224 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 NMRK2Q9NPI5 230 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 TFCP2L1Q9NZI6 479 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 PUF60Q9UHX1 559 aaKnown RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 EVLQ9UI08 416 aaPredicted RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 ZFR2Q9UPR6 939 aaKnown RBP4.22□□□□□ -1.73
CDKL5-208ENST00000624953 CDY2AQ9Y6F7 541 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 ADAMTSL1Q8N6G6 1762 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 TRPM7Q96QT4 1865 aa4.22□□□□□ -1.73
CDKL5-208ENST00000624953 TTC21AQ8NDW8 1320 aa4.21□□□□□ -1.73
CDKL5-208ENST00000624953 C10orf71Q711Q0 1435 aa4.21□□□□□ -1.73
CDKL5-208ENST00000624953 FZD9O00144 591 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 LY86O95711 162 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 HNRNPLP14866 589 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 GPR3P46089 330 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 MTNR1BP49286 362 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 PRELPP51888 382 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 MEF2AQ02078 507 aaPredicted RBP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 FAPQ12884 760 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 RIN1Q13671 783 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 MAN2A1Q16706 1144 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 RNF219Q5W0B1 726 aaPredicted RBP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 TAS1R1Q7RTX1 841 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 POLNQ7Z5Q5 900 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 NECAB2Q7Z6G3 386 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 DDX42Q86XP3 938 aaKnown RBP eCLIP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 PLA2G15Q8NCC3 412 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 KCNH5Q8NCM2 988 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 OR14K1Q8NGZ2 314 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 WDR48Q8TAF3 677 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 TSPEARQ8WU66 669 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 HIST1H2AHQ96KK5 128 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 HIST1H2AJQ99878 128 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 NOL10Q9BSC4 688 aaKnown RBP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 TRIM8Q9BZR9 551 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 ZNF277Q9NRM2 450 aaPredicted RBP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 DNAI1Q9UI46 699 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 MAGEL2Q9UJ55 1249 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 KTN1Q86UP2 1357 aaKnown RBP4.21□□□□□ -1.74
CDKL5-208ENST00000624953 THSD7BQ9C0I4 1608 aa4.21□□□□□ -1.74
CDKL5-208ENST00000624953 CASP8AP2Q9UKL3 1982 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 UBR2Q8IWV8 1755 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 A0A1W2PP64 1363 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 MAFGO15525 162 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 DNAJC6O75061 913 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 TOMM70O94826 608 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 CLSTN1O94985 981 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 KIR2DL3P43628 341 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 WNT3AP56704 352 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 MRPS9P82933 396 aaKnown RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 ATP2C1P98194 919 aaPredicted RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 CD69Q07108 199 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 FOXL1Q12952 345 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 TCIRG1Q13488 830 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 C19orf54Q5BKX5 351 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 SPTY2D1Q68D10 685 aaPredicted RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 MSL3Q8N5Y2 521 aaKnown RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 SHCBP1Q8NEM2 672 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 GAB3Q8WWW8 586 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 HOXB13Q92826 284 aaPredicted RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 C8orf49Q96NF6 230 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 LRRC37BQ96QE4 947 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 KLC2Q9H0B6 622 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 KCTD10Q9H3F6 313 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 PLA2G3Q9NZ20 509 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 HECAQ9UBI9 543 aaPredicted RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 ST6GALNAC2Q9UJ37 374 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 CCNL1Q9UK58 526 aaPredicted RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 ATP8A1Q9Y2Q0 1164 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 SLX4Q8IY92 1834 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 NCAPD2Q15021 1401 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 EDC4Q6P2E9 1401 aaKnown RBP4.2□□□□□ -1.74
CDKL5-208ENST00000624953 NSD3Q9BZ95 1437 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 ZNF536O15090 1300 aa4.2□□□□□ -1.74
CDKL5-208ENST00000624953 SCN4AP35499 1836 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 PALLDQ8WX93 1383 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 KRTAP23-1A1A580 65 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 TOX4O94842 621 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 FSBPO95073 299 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 PCDH8O95206 1070 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 JUNP05412 331 aaKnown RBP4.19□□□□□ -1.74
CDKL5-208ENST00000624953 KCNA3P22001 575 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 CDKN1CP49918 316 aaPredicted RBP4.19□□□□□ -1.74
CDKL5-208ENST00000624953 KRT85P78386 507 aa4.19□□□□□ -1.74
CDKL5-208ENST00000624953 ZNF568Q3ZCX4 644 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms