RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 PKN2Q16513 984 aaKnown RBP16.13■□□□□ 0.17
PMS1-221ENST00000624204 ZNF568Q3ZCX4 644 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 ZNF365Q70YC5 407 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 TUBGCP5Q96RT8 1024 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 TTC1Q99614 292 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 SYNCQ9H7C4 482 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 NUMBLQ9Y6R0 609 aa16.13■□□□□ 0.17
PMS1-221ENST00000624204 DLEC1Q9Y238 1755 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 GOLGA8SH3BPF8 625 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 GOLGA8MH3BSY2 632 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 GSC2O15499 205 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 TROVE2P10155 538 aaKnown RBP eCLIP16.12■□□□□ 0.17
PMS1-221ENST00000624204 COG2Q14746 738 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 SIX1Q15475 284 aaPredicted RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 CYP1B1Q16678 543 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 IZUMO2Q6UXV1 221 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 GSTA5Q7RTV2 222 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 ZNF564Q8TBZ8 553 aaPredicted RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 NUP85Q9BW27 656 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 BHMT2Q9H2M3 363 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 HEY2Q9UBP5 337 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 MROH7Q68CQ1 1323 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 OPHN1O60890 802 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 PFDN1O60925 122 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 IL6STP40189 918 aaPredicted RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 PIK3CAP42336 1068 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 RTP1P59025 263 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 STAT4Q14765 748 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 C3orf67Q6ZVT6 689 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 SLC25A41Q8N5S1 370 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 ATL2Q8NHH9 583 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 FAM161BQ96MY7 647 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 TRAIPQ9BWF2 469 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 SPATA16Q9BXB7 569 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 PCIF1Q9H4Z3 704 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 ZWILCHQ9H900 591 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 UBR2Q8IWV8 1755 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 MYL7Q01449 175 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 AP1B1Q10567 949 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 IKQ13123 557 aaPredicted RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 PDK4Q16654 411 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 SLC45A4Q5BKX6 768 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 RHBDF2Q6PJF5 856 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 LVRNQ6Q4G3 990 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 CEP128Q6ZU80 1094 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 CATSPER3Q86XQ3 398 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 SH3TC2Q8TF17 1288 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 ABTB1Q969K4 478 aaPredicted RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 GPR88Q9GZN0 384 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 FBXO6Q9NRD1 293 aaPredicted RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 DNAAF2Q9NVR5 837 aaKnown RBP16.12■□□□□ 0.17
PMS1-221ENST00000624204 LGALS13Q9UHV8 139 aa16.12■□□□□ 0.17
PMS1-221ENST00000624204 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.12■□□□□ 0.17
PMS1-221ENST00000624204 KIF13AQ9H1H9 1805 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 TXNDC9O14530 226 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 CYP1A1P04798 512 aaPredicted RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 RRM1P23921 792 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 NMT1P30419 496 aaKnown RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 CDK8P49336 464 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 EPC2Q52LR7 807 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 PLEKHG4Q58EX7 1191 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 TRABD2AQ86V40 505 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 RFWD2Q8NHY2 731 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 RBM15Q96T37 977 aaKnown RBP eCLIP16.11■□□□□ 0.17
PMS1-221ENST00000624204 SH2D3AQ9BRG2 576 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 VPS37BQ9H9H4 285 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 KRT82Q9NSB4 513 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 ATXN10Q9UBB4 475 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 GTPBP10A4D1E9 387 aaKnown RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 TRAFD1O14545 582 aaPredicted RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 ESRRAP11474 423 aaPredicted RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 WDR72Q3MJ13 1102 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 SYCP2LQ5T4T6 812 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 PHLDB3Q6NSJ2 640 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 ZNF513Q8N8E2 541 aaPredicted RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 ZNF653Q96CK0 615 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 HIC2Q96JB3 615 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 CENPKQ9BS16 269 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 LRRC19Q9H756 370 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 SAYSD1Q9NPB0 183 aa16.11■□□□□ 0.17
PMS1-221ENST00000624204 LARSQ9P2J5 1176 aaKnown RBP16.11■□□□□ 0.17
PMS1-221ENST00000624204 ARAP2Q8WZ64 1704 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 SLC16A3O15427 465 aaKnown RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 MYBPC3Q14896 1274 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 ARHGAP18Q8N392 663 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 SNRNP27Q8WVK2 155 aaKnown RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 ZNF75CPQ92670 426 aaPredicted RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 SLC5A5Q92911 643 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 SYT11Q9BT88 431 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 PLVAPQ9BX97 442 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 KLHL11Q9NVR0 708 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 RPL26L1Q9UNX3 145 aaKnown RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 ZBED4O75132 1171 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 SPATA31D3P0C874 917 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 AMPD1P23109 780 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 TPP2P29144 1249 aaPredicted RBP16.1■□□□□ 0.17
PMS1-221ENST00000624204 IZUMO3Q5VZ72 239 aa16.1■□□□□ 0.17
PMS1-221ENST00000624204 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms