RNA–Protein interactions for RNA: ENST00000622776.1

CPSF1-214, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 1,029 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-214ENST00000622776 FBXO18Q8NFZ0 1043 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 UROC1Q96N76 676 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 LLPHQ9BRT6 129 aaKnown RBP26.14■■□□□ 1.78
CPSF1-214ENST00000622776 HCFC1R1Q9NWW0 138 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 DNMT3BQ9UBC3 853 aaKnown RBP26.14■■□□□ 1.78
CPSF1-214ENST00000622776 LRWD1Q9UFC0 647 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 KIAA1024Q9UPX6 916 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 TNFSF13BQ9Y275 285 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 BACE2Q9Y5Z0 518 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 CDY1Q9Y6F8 540 aa26.14■■□□□ 1.78
CPSF1-214ENST00000622776 TRAPPC3O43617 180 aa26.13■■□□□ 1.77
CPSF1-214ENST00000622776 EIF5BO60841 1220 aaKnown RBP26.13■■□□□ 1.77
CPSF1-214ENST00000622776 GLULP15104 373 aa26.13■■□□□ 1.77
CPSF1-214ENST00000622776 TKTP29401 623 aaKnown RBP26.13■■□□□ 1.77
CPSF1-214ENST00000622776 SNW1Q13573 536 aaKnown RBP26.13■■□□□ 1.77
CPSF1-214ENST00000622776 PABPC1LQ4VXU2 614 aaKnown RBP26.13■■□□□ 1.77
CPSF1-214ENST00000622776 GOLGA2P5Q9HBQ8 144 aa26.13■■□□□ 1.77
CPSF1-214ENST00000622776 KCNH3Q9ULD8 1083 aa26.13■■□□□ 1.77
CPSF1-214ENST00000622776 SMIM28A0A1B0GU29 152 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 I3L4J1 428 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 LRRN2O75325 713 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 SP9P0CG40 484 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 ID4P47928 161 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 TRAPPC10P48553 1259 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 GNL2Q13823 731 aaKnown RBP26.12■■□□□ 1.77
CPSF1-214ENST00000622776 ANKS3Q6ZW76 656 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 NPAS3Q8IXF0 933 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 CEP120Q8N960 986 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 C3orf58Q8NDZ4 430 aa26.12■■□□□ 1.77
CPSF1-214ENST00000622776 DDX27Q96GQ7 796 aaKnown RBP26.12■■□□□ 1.77
CPSF1-214ENST00000622776 DDX19AQ9NUU7 478 aaKnown RBP26.12■■□□□ 1.77
CPSF1-214ENST00000622776 F5P12259 2224 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 GRM5P41594 1212 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 BRCC3P46736 316 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 YARSP54577 528 aaKnown RBP26.11■■□□□ 1.77
CPSF1-214ENST00000622776 PDIA5Q14554 519 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 NBR1Q14596 966 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 SLC44A4Q53GD3 710 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 ACO2Q99798 780 aaKnown RBP26.11■■□□□ 1.77
CPSF1-214ENST00000622776 KXD1Q9BQD3 176 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 CCDC94Q9BW85 323 aaPredicted RBP26.11■■□□□ 1.77
CPSF1-214ENST00000622776 CDT1Q9H211 546 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 PPP4R2Q9NY27 417 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 NOL7Q9UMY1 257 aaKnown RBP26.11■■□□□ 1.77
CPSF1-214ENST00000622776 DCHS1Q96JQ0 3298 aa26.11■■□□□ 1.77
CPSF1-214ENST00000622776 KANSL1LA0AUZ9 987 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 CCDC169A6NNP5 214 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 SEC24BO95487 1268 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 PEX3P56589 373 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 PRKCQQ04759 706 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 SOX4Q06945 474 aaPredicted RBP26.1■■□□□ 1.77
CPSF1-214ENST00000622776 MLF2Q15773 248 aaPredicted RBP26.1■■□□□ 1.77
CPSF1-214ENST00000622776 XKR4Q5GH76 650 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 ZC3H14Q6PJT7 736 aaKnown RBP26.1■■□□□ 1.77
CPSF1-214ENST00000622776 ALKAL1Q6UXT8 129 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 SNX29Q8TEQ0 813 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 ING5Q8WYH8 240 aa26.1■■□□□ 1.77
CPSF1-214ENST00000622776 DDX23Q9BUQ8 820 aaKnown RBP26.1■■□□□ 1.77
CPSF1-214ENST00000622776 TOPORSQ9NS56 1045 aaPredicted RBP26.1■■□□□ 1.77
CPSF1-214ENST00000622776 MRPS23Q9Y3D9 190 aaKnown RBP26.1■■□□□ 1.77
CPSF1-214ENST00000622776 NPTX2P47972 431 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 OSTNP61366 133 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 HMGN5P82970 282 aaKnown RBP26.09■■□□□ 1.77
CPSF1-214ENST00000622776 PFKPQ01813 784 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 ZNF568Q3ZCX4 644 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 ERMP1Q7Z2K6 904 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 DAW1Q8N136 415 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 TMEM134Q9H6X4 195 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 PTPRHQ9HD43 1115 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 STK24Q9Y6E0 443 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 PHLPP2Q6ZVD8 1323 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 FANCMQ8IYD8 2048 aa26.09■■□□□ 1.77
CPSF1-214ENST00000622776 PTGDRQ13258 359 aa26.08■■□□□ 1.77
CPSF1-214ENST00000622776 IGSF22Q8N9C0 903 aa26.08■■□□□ 1.77
CPSF1-214ENST00000622776 FAM184AQ8NB25 1140 aa26.08■■□□□ 1.77
CPSF1-214ENST00000622776 TARS2Q9BW92 718 aaKnown RBP26.08■■□□□ 1.77
CPSF1-214ENST00000622776 MRPL4Q9BYD3 311 aaKnown RBP26.08■■□□□ 1.77
CPSF1-214ENST00000622776 RAB34Q9BZG1 259 aa26.08■■□□□ 1.77
CPSF1-214ENST00000622776 SLC38A7Q9NVC3 462 aa26.08■■□□□ 1.77
CPSF1-214ENST00000622776 DNM3Q9UQ16 869 aa26.08■■□□□ 1.77
CPSF1-214ENST00000622776 MIA3Q5JRA6 1907 aa26.08■■□□□ 1.76
CPSF1-214ENST00000622776 E9PMD0 336 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 RHOP08100 348 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 ROR1Q01973 937 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 DMP1Q13316 513 aaPredicted RBP26.07■■□□□ 1.76
CPSF1-214ENST00000622776 UBXN2BQ14CS0 331 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 SLC8B1Q6J4K2 584 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 TAS1R3Q7RTX0 852 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 MAML2Q8IZL2 1156 aaPredicted RBP26.07■■□□□ 1.76
CPSF1-214ENST00000622776 ZNF461Q8TAF7 563 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 MCRS1Q96EZ8 462 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 ZMAT2Q96NC0 199 aaKnown RBP26.07■■□□□ 1.76
CPSF1-214ENST00000622776 BCO2Q9BYV7 579 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 OSBPL6Q9BZF3 934 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 ARHGAP28Q9P2N2 729 aa26.07■■□□□ 1.76
CPSF1-214ENST00000622776 MTF2Q9Y483 593 aaPredicted RBP26.07■■□□□ 1.76
CPSF1-214ENST00000622776 ARHGEF37A1IGU5 675 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 PODXLO00592 558 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 HIP1RO75146 1068 aa26.06■■□□□ 1.76
CPSF1-214ENST00000622776 ELF1P32519 619 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms