RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 LRRD1A4D1F6 860 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CREB3O43889 395 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 FAM200BP0CF97 657 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 EZRP15311 586 aaKnown RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 PSMA2P25787 234 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 AXLP30530 894 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CASP14P31944 242 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CDK17Q00537 523 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CKAP4Q07065 602 aaKnown RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CD302Q8IX05 232 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 GABPB2Q8TAK5 448 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 HAUS1Q96CS2 278 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 ZBTB10Q96DT7 871 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 DONSONQ9NYP3 566 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 TRPM5Q9NZQ8 1165 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 ADAMTS1Q9UHI8 967 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 PRRC2BQ5JSZ5 2229 aaKnown RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 GJA5P36382 358 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 TM4SF4P48230 202 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 FBXO47Q5MNV8 452 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC105Q8IYK2 499 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 TTC30BQ8N4P2 665 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 HVCN1Q96D96 273 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 GOLPH3LQ9H4A5 285 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 URB1O60287 2271 aaKnown RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 SNHG28P0DPA3 235 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 RAD51Q06609 339 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 CLUL1Q15846 466 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 UAP1Q16222 522 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 C11orf57Q6ZUT1 292 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 FBXO32Q969P5 355 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 MRRFQ96E11 262 aaKnown RBP9.69□□□□□ -0.86
HDAC9-229ENST00000622668 TTC25Q96NG3 672 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 ZWILCHQ9H900 591 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 TRIOBPQ9H2D6 2365 aa9.69□□□□□ -0.86
HDAC9-229ENST00000622668 LOC102724159A0A0B4J2E5 919 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 I3L4J1 428 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PPP1R11O60927 126 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 LGR5O75473 907 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 AP1G2O75843 785 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ADH1AP07327 375 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 NFKBIAP25963 317 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ITGB3BPQ13352 177 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ORC1Q13415 861 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PWP2Q15269 919 aaKnown RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ZRSR2Q15696 482 aaKnown RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 CLEC4DQ8WXI8 215 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 INTS2Q9H0H0 1204 aaKnown RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 RBSNQ9H1K0 784 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 SMPD4Q9NXE4 827 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PCSK1NQ9UHG2 260 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PRR23AA6NEV1 266 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 MUTP22033 750 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ACAT1P24752 427 aaKnown RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF75DP51815 510 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 KPNA1P52294 538 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 SLC24A5Q71RS6 500 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 FMR1NBQ8N0W7 255 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 CCDC63Q8NA47 563 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ZBTB45Q96K62 511 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PTPN18Q99952 460 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 C7orf25Q9BPX7 421 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 AGPAT3Q9NRZ7 376 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 MRPS23Q9Y3D9 190 aaKnown RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PPME1Q9Y570 386 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 A0A1W2PQ45 241 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 A0A1W2PQY0 241 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 CTAGE15A4D2H0 777 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 CTAGE8P0CG41 777 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 IFNAR2P48551 515 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 DRAP1Q14919 205 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 KRT31Q15323 416 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ANO4Q32M45 955 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 NAA35Q5VZE5 725 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ANKRD40Q6AI12 368 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 CTAGE6Q86UF2 777 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 CTAGE4Q8IX94 777 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 KCTD6Q8NC69 237 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PRIMPOLQ96LW4 560 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 KIF2CQ99661 725 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 SYNDIG1Q9H7V2 258 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 FAM105AQ9NUU6 356 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 NFASCO94856 1347 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 SRGAP2O75044 1071 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PSMD10O75832 226 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 AMPD2Q01433 879 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 PPP1R2P3Q6NXS1 205 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ACOT1Q86TX2 421 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ADGRF2Q8IZF7 708 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 AFAP1L1Q8TED9 768 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 DDX50Q9BQ39 737 aaKnown RBP9.68□□□□□ -0.86
HDAC9-229ENST00000622668 DESI2Q9BSY9 194 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 NIF3L1Q9GZT8 377 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 SPG21Q9NZD8 308 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 ZNF148Q9UQR1 794 aa9.68□□□□□ -0.86
HDAC9-229ENST00000622668 FGRP09769 529 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms