RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 ZC2HC1CQ53FD0 456 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 TMEM174Q8WUU8 243 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 DYDC2Q96IM9 177 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 DNAJC18Q9H819 358 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 IGLV3-22A0A075B6J6 115 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 NPM3O75607 178 aaKnown RBP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 PSMD10O75832 226 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 TAC1P20366 129 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 ATP5DP30049 168 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 SCNN1DP51172 638 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 RRP1BQ14684 758 aaKnown RBP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 ODR4Q5SWX8 454 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 TATDN1Q6P1N9 297 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 CCNJLQ8IV13 435 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 FAM136AQ96C01 138 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 SLC7A6OSQ96CW6 309 aaPredicted RBP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 ZDHHC15Q96MV8 337 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 FIZ1Q96SL8 496 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 PLVAPQ9BX97 442 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 WDR11Q9BZH6 1224 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 UBE2OQ9C0C9 1292 aaKnown RBP13.89□□□□□ -0.19
CHD1L-210ENST00000622533 OCEL1Q9H607 264 aa13.89□□□□□ -0.19
CHD1L-210ENST00000622533 FOXN3O00409 490 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 NVLO15381 856 aaKnown RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 FTLP02792 175 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 GZMAP12544 262 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 BMP3P12645 472 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 ALAS1P13196 640 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 GYS1P13807 737 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 CHKAP35790 457 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 SETDB1Q15047 1291 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 KHDC1Q4VXA5 237 aaKnown RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 TRMT10CQ7L0Y3 403 aaKnown RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 AGGF1Q8N302 714 aaeCLIP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 SLC5A5Q92911 643 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 RBM41Q96IZ5 413 aaKnown RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 PWWP2AQ96N64 755 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 VCXQ9H320 206 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 SLCO1B3Q9NPD5 702 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
CHD1L-210ENST00000622533 E7ENQ6 273 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 ABLIM1O14639 778 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 TRIM49P0CI25 452 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 TRIM49CP0CI26 452 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 T-ENOLP0DO92 83 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 CETPP11597 493 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 CRKP46108 304 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 DNAJC3Q13217 504 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 KYNUQ16719 465 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 PHLDB3Q6NSJ2 640 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 ZNF333Q96JL9 665 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 FAM210AQ96ND0 272 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 LRRC37BQ96QE4 947 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 TMEM206Q9H813 350 aa13.88□□□□□ -0.19
CHD1L-210ENST00000622533 G3V3G9 751 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 ATP9AO75110 1047 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 NDUFB10O96000 172 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 MAPTP10636 758 aaKnown RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 POLGP54098 1239 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 NFIAQ12857 509 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 COG2Q14746 738 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 DCAF8Q5TAQ9 597 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 PRUNE1Q86TP1 453 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 ZC3H18Q86VM9 953 aaKnown RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 ENDOVQ8N8Q3 282 aaKnown RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 LMO3Q8TAP4 145 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 ART4Q93070 314 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 MAGEB18Q96M61 343 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 DDX50Q9BQ39 737 aaKnown RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 IDI2Q9BXS1 227 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 AAASQ9NRG9 546 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.87□□□□□ -0.195e-6■■□□□ 12.1
CHD1L-210ENST00000622533 SCOCQ9UIL1 159 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 GAS7O60861 476 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 CALCOCO2Q13137 446 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 CCDC6Q16204 474 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 ABCB5Q2M3G0 1257 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 RBM26Q5T8P6 1007 aaKnown RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 CPNE8Q86YQ8 564 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 C12orf50Q8NA57 414 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 LRRC8CQ8TDW0 803 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 NRG4Q8WWG1 115 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 UBE2TQ9NPD8 197 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 NKIRAS1Q9NYS0 192 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 MAPK13O15264 365 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 PMM2O15305 246 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 KCNA3P22001 575 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 COILP38432 576 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 CACNA2D1P54289 1103 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 LRRC23Q53EV4 343 aaPredicted RBP13.87□□□□□ -0.19
CHD1L-210ENST00000622533 SIAH1Q8IUQ4 282 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 CYP2W1Q8TAV3 490 aa13.87□□□□□ -0.19
CHD1L-210ENST00000622533 FAM81AQ8TBF8 368 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms