RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ZNF180Q9UJW8 692 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 USTQ9Y2C2 406 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 ZNF510Q9Y2H8 683 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 TMA7Q9Y2S6 64 aaKnown RBP11.41□□□□□ -0.58
CDH1-214ENST00000621016 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 UNCXA6NJT0 531 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 HAUS6Q7Z4H7 955 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 PASD1Q8IV76 773 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 GMCL1Q96IK5 515 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 SRPK1Q96SB4 655 aaKnown RBP11.41□□□□□ -0.58
CDH1-214ENST00000621016 AZI2Q9H6S1 392 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 OLFML3Q9NRN5 406 aa11.41□□□□□ -0.58
CDH1-214ENST00000621016 GMNCA6NCL1 334 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 YDJCA8MPS7 323 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 SPATA31D3P0C874 917 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 PYGMP11217 842 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 PRKCIP41743 596 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 MXI1P50539 228 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 ALDH5A1P51649 535 aaPredicted RBP11.4□□□□□ -0.58
CDH1-214ENST00000621016 RUFY4Q6ZNE9 571 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 SPATA31D4Q6ZUB0 917 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 PRUNE1Q86TP1 453 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 JAMLQ86YT9 394 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 MIPOL1Q8TD10 442 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 ZNF653Q96CK0 615 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 CORO1BQ9BR76 489 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 PDGFDQ9GZP0 370 aaPredicted RBP11.4□□□□□ -0.58
CDH1-214ENST00000621016 TMEM59LQ9UK28 342 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 CENPFP49454 3210 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 CLDN3O15551 220 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 DENND2CQ68D51 928 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 CCDC137Q6PK04 289 aaKnown RBP11.4□□□□□ -0.58
CDH1-214ENST00000621016 ANKRD42Q8N9B4 389 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 MAGEC3Q8TD91 643 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 EPS8L3Q8TE67 593 aaKnown RBP11.4□□□□□ -0.58
CDH1-214ENST00000621016 USP33Q8TEY7 942 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 CHURC1Q8WUH1 139 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 RAPGEF5Q92565 580 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 HES6Q96HZ4 224 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 MBOAT7Q96N66 472 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 PCDHB18PQ96TA0 734 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 IDI2Q9BXS1 227 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 HSPBP1Q9NZL4 362 aa11.4□□□□□ -0.58
CDH1-214ENST00000621016 COL5A3P25940 1745 aaPredicted RBP11.4□□□□□ -0.58
CDH1-214ENST00000621016 SLC16A3O15427 465 aaKnown RBP11.4□□□□□ -0.59
CDH1-214ENST00000621016 ATP9AO75110 1047 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 NAT2P11245 290 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 PPP2R2AP63151 447 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 SKOR1P84550 965 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 PRKG1Q13976 671 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 UGCGQ16739 394 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 CYFIP1Q7L576 1253 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 NUP85Q9BW27 656 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 KCNK9Q9NPC2 374 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 KLHL11Q9NVR0 708 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 ASIC3Q9UHC3 531 aa11.4□□□□□ -0.59
CDH1-214ENST00000621016 MRPL11Q9Y3B7 192 aaKnown RBP11.4□□□□□ -0.59
CDH1-214ENST00000621016 CCDC188H7C350 402 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 MAGEB3O15480 346 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 VIL1P09327 827 aaKnown RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 ERFP50548 548 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 NOP9Q86U38 636 aaKnown RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 ARFGAP2Q8N6H7 521 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 CPA5Q8WXQ8 436 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 L3MBTL3Q96JM7 780 aaPredicted RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 ERP44Q9BS26 406 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 GPR88Q9GZN0 384 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 ITM2BQ9Y287 266 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 TELO2Q9Y4R8 837 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 ANKRD62A6NC57 917 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 ANKRD63C9JTQ0 380 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 RGS16O15492 202 aaPredicted RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 TMEM253P0C7T8 217 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 ATP2A2P16615 1042 aaKnown RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 CIITAP33076 1130 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 PMS2P54278 862 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 MTMR1Q13613 665 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 LONRF1Q17RB8 773 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 LMNTD2Q8IXW0 634 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 PLEKHO2Q8TD55 490 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 TAAR1Q96RJ0 339 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 MRGBPQ9NV56 204 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 AGAP1Q9UPQ3 857 aa11.39□□□□□ -0.59
CDH1-214ENST00000621016 TDRKHQ9Y2W6 561 aaKnown RBP11.39□□□□□ -0.59
CDH1-214ENST00000621016 DDX3YO15523 660 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 GJB6O95452 261 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 NFKBIAP25963 317 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 PSMC4P43686 418 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 RPL21P46778 160 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
CDH1-214ENST00000621016 PDE6CP51160 858 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 TNIP1Q15025 636 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 SEL1L2Q5TEA6 688 aa11.38□□□□□ -0.59
CDH1-214ENST00000621016 MOXD1Q6UVY6 613 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms