RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PANK2Q9BZ23 570 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 CCDC113Q9H0I3 377 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 KIAA1468Q9P260 1216 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 CCDC39Q9UFE4 941 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 DNM3Q9UQ16 869 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 STK24Q9Y6E0 443 aa17.64■□□□□ 0.41
CD40-207ENST00000620709 THP07101 528 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 SLFN14P0C7P3 912 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 HOXD11P31277 338 aaPredicted RBP17.63■□□□□ 0.41
CD40-207ENST00000620709 EFNA5P52803 228 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 NHLH1Q02575 133 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 TUSC3Q13454 348 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 ZDHHC14Q8IZN3 488 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 PLCD3Q8N3E9 789 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 RASSF8Q8NHQ8 419 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 KCNH6Q9H252 994 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 CXCL16Q9H2A7 254 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 DPP7Q9UHL4 492 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 ZNF318Q5VUA4 2279 aa17.63■□□□□ 0.41
CD40-207ENST00000620709 K7ERI5 159 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 RFPL2O75678 378 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 PDGFBP01127 241 aaPredicted RBP17.62■□□□□ 0.41
CD40-207ENST00000620709 VCPP55072 806 aaKnown RBP17.62■□□□□ 0.41
CD40-207ENST00000620709 PEX3P56589 373 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 E2F4Q16254 413 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 STX1AQ16623 288 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 DCAF4L1Q3SXM0 396 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 ATF7IP2Q5U623 682 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 PRSS55Q6UWB4 352 aaPredicted RBP17.62■□□□□ 0.41
CD40-207ENST00000620709 OTOP3Q7RTS5 596 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 RNF168Q8IYW5 571 aaPredicted RBP17.62■□□□□ 0.41
CD40-207ENST00000620709 PIDD1Q9HB75 910 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 C2orf16Q68DN1 1984 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 SF3B1O75533 1304 aaKnown RBP eCLIP17.62■□□□□ 0.41
CD40-207ENST00000620709 PTGESO14684 152 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 EFEMP2O95967 443 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 GBP2P32456 591 aaPredicted RBP17.62■□□□□ 0.41
CD40-207ENST00000620709 KARSQ15046 597 aaKnown RBP17.62■□□□□ 0.41
CD40-207ENST00000620709 POSTNQ15063 836 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 GLRA4Q5JXX5 417 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 NT5DC1Q5TFE4 455 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 FAM171A1Q5VUB5 890 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 UBALD2Q8IYN6 164 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 PLIN2Q99541 437 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 RBSNQ9H1K0 784 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.62■□□□□ 0.41
CD40-207ENST00000620709 CHST7Q9NS84 486 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 USTQ9Y2C2 406 aa17.62■□□□□ 0.41
CD40-207ENST00000620709 ZMYM2Q9UBW7 1377 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 ZDBF2Q9HCK1 2354 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 TGM5O43548 720 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 HIP1RO75146 1068 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 KIF4AO95239 1232 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 DEKP35659 375 aaKnown RBP17.61■□□□□ 0.41
CD40-207ENST00000620709 STAT6P42226 847 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 OSTNP61366 133 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 PNOCQ13519 176 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 RTP2Q5QGT7 225 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 C15orf39Q6ZRI6 1047 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 APBB1IPQ7Z5R6 666 aaPredicted RBP17.61■□□□□ 0.41
CD40-207ENST00000620709 PRSS33Q8NF86 280 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 SMG7Q92540 1137 aaKnown RBP17.61■□□□□ 0.41
CD40-207ENST00000620709 CALML4Q96GE6 196 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 RUSC1Q9BVN2 902 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 CUEDC2Q9H467 287 aa17.61■□□□□ 0.41
CD40-207ENST00000620709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
CD40-207ENST00000620709 SFI1A8K8P3 1242 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 SLC26A4O43511 780 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 CAVIN2O95810 425 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 NPTX2P47972 431 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 CREMQ03060 361 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 RAD51AP2Q09MP3 1159 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 DMP1Q13316 513 aaPredicted RBP17.6■□□□□ 0.41
CD40-207ENST00000620709 RRAGBQ5VZM2 374 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 ERCC4Q92889 916 aaPredicted RBP17.6■□□□□ 0.41
CD40-207ENST00000620709 MFSD1Q9H3U5 465 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 MAGEF1Q9HAY2 307 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 KMT5AQ9NQR1 393 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 ANO10Q9NW15 660 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 DENND4AQ7Z401 1863 aa17.6■□□□□ 0.41
CD40-207ENST00000620709 HARSP12081 509 aaKnown RBP17.59■□□□□ 0.41
CD40-207ENST00000620709 AVPR2P30518 371 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 ZNF568Q3ZCX4 644 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 KCNK18Q7Z418 384 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 CMASQ8NFW8 434 aaPredicted RBP17.59■□□□□ 0.41
CD40-207ENST00000620709 PAGE5Q96GU1 130 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 CDK5RAP3Q96JB5 506 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 TCHPQ9BT92 498 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 TTPALQ9BTX7 342 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 MMTAG2Q9BU76 263 aaKnown RBP17.59■□□□□ 0.41
CD40-207ENST00000620709 FNIP2Q9P278 1114 aa17.59■□□□□ 0.41
CD40-207ENST00000620709 PLCG1P19174 1290 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 YARSP54577 528 aaKnown RBP17.58■□□□□ 0.41
CD40-207ENST00000620709 PTPN5P54829 565 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 PSMD5Q16401 504 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 ANO6Q4KMQ2 910 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 RINT1Q6NUQ1 792 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 RNF214Q8ND24 703 aa17.58■□□□□ 0.41
CD40-207ENST00000620709 STAMQ92783 540 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms