RNA–Protein interactions for RNA: ENST00000620463.1

COL1A2-213, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL1A2, Length 4,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-213ENST00000620463 NEMP1O14524 444 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 TNNC2P02585 160 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
COL1A2-213ENST00000620463 GCLMP48507 274 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 GALK1P51570 392 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 CDK17Q00537 523 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 RASA2Q15283 850 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 RHOT1Q8IXI2 618 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 C17orf50Q8WW18 174 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 CENPTQ96BT3 561 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 KLC2Q9H0B6 622 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 USP21Q9UK80 565 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 SMIM31A0A1B0GVY4 71 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 ARHGEF37A1IGU5 675 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 C16orf96A6NNT2 1141 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 SMAPO00193 183 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 HNRNPDLO14979 420 aaKnown RBP13.84□□□□□ -0.19
COL1A2-213ENST00000620463 TNFAIP8O95379 198 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 USP46P62068 366 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 KNOP1Q1ED39 458 aaKnown RBP13.84□□□□□ -0.19
COL1A2-213ENST00000620463 PPP1R15BQ5SWA1 713 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 MEI1Q5TIA1 1274 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 FBXL13Q8NEE6 735 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 GIPC2Q8TF65 315 aa13.84□□□□□ -0.19
COL1A2-213ENST00000620463 TBC1D12O60347 775 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 KRT36O76013 467 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 SLC9A1P19634 815 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 ANXA13P27216 316 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 XKR9Q5GH70 373 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 CLVS1Q8IUQ0 354 aaPredicted RBP13.83□□□□□ -0.19
COL1A2-213ENST00000620463 FLCNQ8NFG4 579 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 E2F7Q96AV8 911 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 FAM118BQ9BPY3 351 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 NAGPAQ9UK23 515 aa13.83□□□□□ -0.19
COL1A2-213ENST00000620463 A8MUI8 341 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 POTECB2RU33 542 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 GNPATO15228 680 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 SRGAP2CP0DJJ0 459 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 ZNF200P98182 395 aaPredicted RBP13.83□□□□□ -0.2
COL1A2-213ENST00000620463 AMPD2Q01433 879 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 TRIM60Q495X7 471 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 FIGNQ5HY92 759 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 TTC13Q8NBP0 860 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 ARHGEF40Q8TER5 1519 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 CPDO75976 1380 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 A6NJR5 290 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 NFIBO00712 420 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 MGRN1O60291 552 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 SHBGP04278 402 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 TRIM49P0CI25 452 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 TRIM49CP0CI26 452 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 MYCLP12524 364 aaPredicted RBP13.83□□□□□ -0.2
COL1A2-213ENST00000620463 VAV1P15498 845 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 COMTP21964 271 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 MCAMP43121 646 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 TRAPPC3LQ5T215 181 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 WLSQ5T9L3 541 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 IQCKQ8N0W5 287 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 MREGQ8N565 214 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 CALML6Q8TD86 181 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 GDPD5Q8WTR4 605 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 FAM111AQ96PZ2 611 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 AGPAT1Q99943 283 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 PPCSQ9HAB8 311 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 DKK3Q9UBP4 350 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 ABL1P00519 1130 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 IGKV5-2P06315 115 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 CAPN1P07384 714 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 S100A5P33763 92 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 KPNA2P52292 529 aaKnown RBP13.83□□□□□ -0.2
COL1A2-213ENST00000620463 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
COL1A2-213ENST00000620463 TBC1D9BQ66K14 1250 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 MAB21L3Q8N8X9 362 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 CCNYQ8ND76 341 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 ACCSQ96QU6 501 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 INTS2Q9H0H0 1204 aaKnown RBP13.83□□□□□ -0.2
COL1A2-213ENST00000620463 FAM53CQ9NYF3 392 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 SHROOM2Q13796 1616 aa13.83□□□□□ -0.2
COL1A2-213ENST00000620463 GOLGA8IPA6NC78 632 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 GOLGA8JA6NMD2 632 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 TYK2P29597 1187 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 RAB27AP51159 221 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 PTK7Q13308 1070 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 GSTA3Q16772 222 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 USP17L2Q6R6M4 530 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 TMPRSS6Q8IU80 811 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL1A2-213ENST00000620463 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.82□□□□□ -0.2
COL1A2-213ENST00000620463 A0A0G2JLW4 131 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 KPNA4O00629 521 aaPredicted RBP13.82□□□□□ -0.2
COL1A2-213ENST00000620463 P4HA2O15460 535 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 RCAN1P53805 252 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 ANTXR2P58335 489 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 ANO4Q32M45 955 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 LACTB2Q53H82 288 aaPredicted RBP13.82□□□□□ -0.2
COL1A2-213ENST00000620463 PPP1R2P3Q6NXS1 205 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 TMEM120AQ9BXJ8 343 aa13.82□□□□□ -0.2
COL1A2-213ENST00000620463 FOXP3Q9BZS1 431 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms