RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 PHKA2P46019 1235 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 ERVK-21P61565 698 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 DSC3Q14574 896 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 FAM102BQ5T8I3 360 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 PDXDC1Q6P996 788 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 GPR161Q8N6U8 529 aaKnown RBP23.32■■□□□ 1.32
SGMS1-210ENST00000619438 RABGGTAQ92696 567 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 CCDC42Q96M95 316 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 TSGA10Q9BZW7 698 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 POLR3FQ9H1D9 316 aaPredicted RBP23.32■■□□□ 1.32
SGMS1-210ENST00000619438 CHST12Q9NRB3 414 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 UBE4BO95155 1302 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 NR2F2P24468 414 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 ARL2P36404 184 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 VAV2P52735 878 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 ZNF131P52739 623 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 WHAMMP3Q1A5X7 153 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 KIAA1328Q86T90 577 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 MAFAQ8NHW3 353 aaPredicted RBP23.32■■□□□ 1.32
SGMS1-210ENST00000619438 JAKMIP2Q96AA8 810 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 C17orf80Q9BSJ5 609 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 ARHGAP20Q9P2F6 1191 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 ODF2LQ9ULJ1 636 aa23.32■■□□□ 1.32
SGMS1-210ENST00000619438 PIN4Q9Y237 131 aaKnown RBP23.32■■□□□ 1.32
SGMS1-210ENST00000619438 SSU72P8A0A1W2PR75 194 aa23.31■■□□□ 1.32
SGMS1-210ENST00000619438 SLC16A3O15427 465 aaKnown RBP23.31■■□□□ 1.32
SGMS1-210ENST00000619438 RPL13P26373 211 aaKnown RBP23.31■■□□□ 1.32
SGMS1-210ENST00000619438 MAPK8IP2Q13387 824 aaPredicted RBP23.31■■□□□ 1.32
SGMS1-210ENST00000619438 PAN2Q504Q3 1202 aaKnown RBP23.31■■□□□ 1.32
SGMS1-210ENST00000619438 CCDC122Q5T0U0 273 aa23.31■■□□□ 1.32
SGMS1-210ENST00000619438 TWF2Q6IBS0 349 aaKnown RBP23.31■■□□□ 1.32
SGMS1-210ENST00000619438 RNF169Q8NCN4 708 aa23.31■■□□□ 1.32
SGMS1-210ENST00000619438 GOLGA1Q92805 767 aa23.31■■□□□ 1.32
SGMS1-210ENST00000619438 ZNF689Q96CS4 500 aaPredicted RBP23.31■■□□□ 1.32
SGMS1-210ENST00000619438 GPRC5CQ9NQ84 441 aa23.31■■□□□ 1.32
SGMS1-210ENST00000619438 ADGRA3Q8IWK6 1321 aa23.31■■□□□ 1.32
SGMS1-210ENST00000619438 TTC3P53804 2025 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 MYBP10242 640 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 FAM189BP81408 668 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 AMPD2Q01433 879 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 ADGRE1Q14246 886 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 SPA17Q15506 151 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 CRIPAKQ8N1N5 446 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 ASAP3Q8TDY4 903 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 PPM1EQ8WY54 764 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 SAMD11Q96NU1 681 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 METTL14Q9HCE5 456 aaKnown RBP23.3■■□□□ 1.32
SGMS1-210ENST00000619438 TMEM161AQ9NX61 479 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 GUCA1BQ9UMX6 200 aa23.3■■□□□ 1.32
SGMS1-210ENST00000619438 EPOPA6NHQ4 379 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 LRRC53A6NM62 1247 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 INO80B-WBP1J3KQ70 363 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 NOL4O94818 638 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 ERLIN2O94905 339 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 GLRA2P23416 452 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 GUCY2CP25092 1073 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 RRAGAQ7L523 313 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 FBXO22Q8NEZ5 403 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 ELAC1Q9H777 363 aaKnown RBP23.29■■□□□ 1.32
SGMS1-210ENST00000619438 MINDY3Q9H8M7 445 aa23.29■■□□□ 1.32
SGMS1-210ENST00000619438 ARGLU1Q9NWB6 273 aaPredicted RBP23.29■■□□□ 1.32
SGMS1-210ENST00000619438 LRRIQ4A6NIV6 560 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 FAM13AO94988 1023 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 PTENP60484 403 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 POU5F1BQ06416 359 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 CAPSQ13938 189 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 EPC2Q52LR7 807 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 CACNA2D4Q7Z3S7 1137 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 TMEM192Q8IY95 271 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 SLC17A8Q8NDX2 589 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 PARVGQ9HBI0 331 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 OGFRQ9NZT2 677 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 ARMCX3Q9UH62 379 aaPredicted RBP23.28■■□□□ 1.32
SGMS1-210ENST00000619438 A0A0U1RQF3 1178 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 ZNF263O14978 683 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 PRPF6O94906 941 aaKnown RBP23.28■■□□□ 1.32
SGMS1-210ENST00000619438 ASTE1Q2TB18 679 aaPredicted RBP23.28■■□□□ 1.32
SGMS1-210ENST00000619438 ECHDC2Q86YB7 292 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 CMTR2Q8IYT2 770 aaKnown RBP23.28■■□□□ 1.32
SGMS1-210ENST00000619438 ABI1Q8IZP0 508 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 MICALL1Q8N3F8 863 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 TRIM10Q9UDY6 481 aa23.28■■□□□ 1.32
SGMS1-210ENST00000619438 ANO9A1A5B4 782 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 TBKBP1A7MCY6 615 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 GCNT3O95395 438 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 FGFR1P11362 822 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 GATMP50440 423 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 KIF11P52732 1056 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 KCNH2Q12809 1159 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 KIF5AQ12840 1032 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 CCDC85BQ15834 202 aaPredicted RBP23.27■■□□□ 1.32
SGMS1-210ENST00000619438 SPOUT1Q5T280 376 aaKnown RBP23.27■■□□□ 1.32
SGMS1-210ENST00000619438 PAPD7Q5XG87 772 aaKnown RBP23.27■■□□□ 1.32
SGMS1-210ENST00000619438 STXBP4Q6ZWJ1 553 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 TXLNBQ8N3L3 684 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 LACRTQ9GZZ8 138 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 RC3H2Q9HBD1 1191 aaKnown RBP23.27■■□□□ 1.32
SGMS1-210ENST00000619438 POLD4Q9HCU8 107 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 PLCB1Q9NQ66 1216 aa23.27■■□□□ 1.32
SGMS1-210ENST00000619438 MYO6Q9UM54 1294 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms