RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-215ENST00000617958 CCDC77Q9BR77 488 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 GPAMQ9HCL2 828 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 TYW1Q9NV66 732 aaKnown RBP11.4□□□□□ -0.58
CPEB1-215ENST00000617958 ANKRD31Q8N7Z5 1873 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 FAM196BA6NMK8 535 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 SMIM22K7EJ46 135 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 HGSO14964 777 aaPredicted RBP11.4□□□□□ -0.58
CPEB1-215ENST00000617958 EXOC3O60645 756 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 SERPINB3P29508 390 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 GRAPQ13588 217 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 CRY2Q49AN0 593 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 FYB2Q5VWT5 728 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 UBL4BQ8N7F7 174 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 RBM46Q8TBY0 533 aaKnown RBP11.4□□□□□ -0.58
CPEB1-215ENST00000617958 GRAPLQ8TC17 118 aaPredicted RBP11.4□□□□□ -0.58
CPEB1-215ENST00000617958 MPP4Q96JB8 637 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 FAM84BQ96KN1 310 aaPredicted RBP11.4□□□□□ -0.58
CPEB1-215ENST00000617958 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 TTC25Q96NG3 672 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 MXD3Q9BW11 206 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 MLXIPLQ9NP71 852 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 KCNQ5Q9NR82 932 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 MTUS1Q9ULD2 1270 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 CHMP2BQ9UQN3 213 aa11.4□□□□□ -0.58
CPEB1-215ENST00000617958 RGL2O15211 777 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 GYG2O15488 501 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 HNRNPCP07910 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ABHD2P08910 425 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 NEK3P51956 506 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ADARP55265 1226 aaKnown RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 RAB15P59190 212 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TMEM62Q0P6H9 643 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 KCNH2Q12809 1159 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 SPIDRQ14159 915 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 KYNUQ16719 465 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 INF2Q27J81 1249 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 CERKLQ49MI3 558 aaPredicted RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 KRT25Q7Z3Z0 450 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 RAD54LQ92698 747 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 MCUR1Q96AQ8 359 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 NSL1Q96IY1 281 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 FNBP1Q96RU3 617 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 BRD8Q9H0E9 1235 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 POLLQ9UGP5 575 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TMED5Q9Y3A6 229 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 SLC5A1P13866 664 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 PLCG2P16885 1265 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 SMARCA1P28370 1054 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 PLOD1Q02809 727 aaPredicted RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 DNAJC3Q13217 504 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TRMT5Q32P41 509 aaKnown RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 IZUMO2Q6UXV1 221 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 NET1Q7Z628 596 aaPredicted RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TDRPQ86YL5 185 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 RHOT2Q8IXI1 618 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 BRIP1Q9BX63 1249 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 NAALADL1Q9UQQ1 740 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 NR2E3Q9Y5X4 410 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 MROH5Q6ZUA9 1318 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ZMYM2Q9UBW7 1377 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 GTPBP10A4D1E9 387 aaKnown RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ANPEPP15144 967 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 OXCT1P55809 520 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ARHGAP4P98171 946 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 DCTN2Q13561 401 aaKnown RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 CFAP157Q5JU67 520 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TSHZ1Q6ZSZ6 1077 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 OLIG1Q8TAK6 271 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 MAML1Q92585 1016 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ALG3Q92685 438 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 DDX12PQ92771 950 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 OXCT2Q9BYC2 517 aaPredicted RBP11.39□□□□□ -0.59
CPEB1-215ENST00000617958 ANKRD2Q9GZV1 360 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 LRRC19Q9H756 370 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 C17orf75Q9HAS0 396 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 STK24Q9Y6E0 443 aa11.39□□□□□ -0.59
CPEB1-215ENST00000617958 TP73O15350 636 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 HAUS5O94927 633 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 ACSL3O95573 720 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 TROVE2P10155 538 aaKnown RBP eCLIP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 TXKP42681 527 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 AP2B1P63010 937 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 CDC16Q13042 620 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 PTPROQ16827 1216 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 EXOC3L4Q17RC7 722 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 SLC44A4Q53GD3 710 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 TMEM63BQ5T3F8 832 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 TMCO4Q5TGY1 634 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 C3orf62Q6ZUJ4 267 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 SRRM1Q8IYB3 904 aaKnown RBP11.38□□□□□ -0.59
CPEB1-215ENST00000617958 VPS52Q8N1B4 723 aa11.38□□□□□ -0.59
CPEB1-215ENST00000617958 PNMA5Q96PV4 448 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms