RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 ARHGAP6O43182 974 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 CXCL10P02778 98 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
PDPN-211ENST00000617617 CXCL8P10145 99 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 ATICP31939 592 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 ADKP55263 362 aaKnown RBP12.68□□□□□ -0.38
PDPN-211ENST00000617617 MAPK8IP2Q13387 824 aaPredicted RBP12.68□□□□□ -0.38
PDPN-211ENST00000617617 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 LRRC8DQ7L1W4 858 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 ZSCAN30Q86W11 494 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 EFCAB13Q8IY85 973 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 THNSL1Q8IYQ7 743 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 RSPH1Q8WYR4 309 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 SEMA4DQ92854 862 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 APBB2Q92870 758 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 BAG1Q99933 345 aaPredicted RBP12.68□□□□□ -0.38
PDPN-211ENST00000617617 FTHL17Q9BXU8 183 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 GPR88Q9GZN0 384 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 AGO3Q9H9G7 860 aaKnown RBP12.68□□□□□ -0.38
PDPN-211ENST00000617617 ITGA11Q9UKX5 1188 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 PADI3Q9ULW8 664 aa12.68□□□□□ -0.38
PDPN-211ENST00000617617 TNNI1P19237 187 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 RFC2P35250 354 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 FAM189BP81408 668 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 PTPN21Q16825 1174 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 CYP26C1Q6V0L0 522 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 UBE2Q1Q7Z7E8 422 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 TMEM192Q8IY95 271 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 HACE1Q8IYU2 909 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 CEP120Q8N960 986 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 HELQQ8TDG4 1101 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 ANKRD36BP1Q96IX9 119 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 PCMTD1Q96MG8 357 aaPredicted RBP12.67□□□□□ -0.38
PDPN-211ENST00000617617 POP1Q99575 1024 aaKnown RBP12.67□□□□□ -0.38
PDPN-211ENST00000617617 UBN1Q9NPG3 1134 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 RGS18Q9NS28 235 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 CNTN6Q9UQ52 1028 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
PDPN-211ENST00000617617 FNDC1Q4ZHG4 1894 aaPredicted RBP12.67□□□□□ -0.38
PDPN-211ENST00000617617 TNNC2P02585 160 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 DLATP10515 647 aaKnown RBP12.67□□□□□ -0.38
PDPN-211ENST00000617617 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
PDPN-211ENST00000617617 MBTPS1Q14703 1052 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 PHLDB3Q6NSJ2 640 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 TRAPPC11Q7Z392 1133 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 CCDC170Q8IYT3 715 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 TAS1R2Q8TE23 839 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 CRACR2AQ9BSW2 395 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 C11orf49Q9H6J7 331 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 GIT1Q9Y2X7 761 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 IPPQ9Y573 584 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 TSC2P49815 1807 aa12.67□□□□□ -0.38
PDPN-211ENST00000617617 SSU72P8A0A1W2PR75 194 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 GFPT2O94808 682 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 LCA5LO95447 670 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 ASS1P00966 412 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 HLA-DRAP01903 254 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 POLR2FP61218 127 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 OR5B17Q8NGF7 314 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 NT5C1BQ96P26 610 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 C1orf112Q9NSG2 853 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 TBX21Q9UL17 535 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 FHOD1Q9Y613 1164 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 A0A0U1RQF3 1178 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 HARSP12081 509 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 SKILP12757 684 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 ACTN1P12814 892 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 TBXAS1P24557 533 aaPredicted RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 FAAP100Q0VG06 881 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 TMEM132DQ14C87 1099 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 JADE1Q6IE81 842 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 CACNA2D4Q7Z3S7 1137 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 UBR7Q8N806 425 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 KIAA1524Q8TCG1 905 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 GINS2Q9Y248 185 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 SCN1AP35498 2009 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 DCDC2CA8MYV0 355 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 F8VZ95 297 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 ZSCAN20P17040 1043 aaPredicted RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 MFAP3P55082 362 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 LRMPQ12912 555 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 GPNMBQ14956 572 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 TSR1Q2NL82 804 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 SEZ6Q53EL9 994 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 PLEKHG4Q58EX7 1191 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 SFMBT2Q5VUG0 894 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 ZNF662Q6ZS27 426 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 SHC3Q92529 594 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
PDPN-211ENST00000617617 DNAJC12Q9UKB3 198 aa12.66□□□□□ -0.38
PDPN-211ENST00000617617 XPOTO43592 962 aaKnown RBP12.65□□□□□ -0.38
PDPN-211ENST00000617617 EOMESO95936 686 aa12.65□□□□□ -0.38
PDPN-211ENST00000617617 SERPING1P05155 500 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms